RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ZNF471Q9BX82 626 aaPredicted RBP16.12■□□□□ 0.17
NUP54-205ENST00000507257 HTTP42858 3142 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 A0A087WV48 116 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 PHYHO14832 338 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 SIGLEC5O15389 551 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 FGF17O60258 216 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 MPZP25189 248 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 CDKN2AP42771 156 aaKnown RBP16.11■□□□□ 0.17
NUP54-205ENST00000507257 PRMT2P55345 433 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 DEFB103AP81534 67 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 DMWDQ09019 674 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 DHRS2Q13268 280 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 RAB11BQ15907 218 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 GAB4Q2WGN9 574 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 ATPAF1Q5TC12 328 aaPredicted RBP16.11■□□□□ 0.17
NUP54-205ENST00000507257 AGBL4Q5VU57 503 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 BIVMQ86UB2 503 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 ZNF676Q8N7Q3 588 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 RSC1A1Q92681 617 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 SLC25A28Q96A46 364 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 SEH1LQ96EE3 360 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 ESRP2Q9H6T0 727 aaKnown RBP16.11■□□□□ 0.17
NUP54-205ENST00000507257 TMEM100Q9NV29 134 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 SLC2A8Q9NY64 477 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 WSB2Q9NYS7 404 aaPredicted RBP16.11■□□□□ 0.17
NUP54-205ENST00000507257 CTSFQ9UBX1 484 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 HIF3AQ9Y2N7 669 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 TMEM14AQ9Y6G1 99 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 GPR31O00270 319 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 LATO43561 262 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 SLC25A12O75746 678 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 CD14P08571 375 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 ZNF735P0CB33 412 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 CD34P28906 385 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 BDKRB2P30411 391 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 DLSTP36957 453 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 RPL35P42766 123 aaKnown RBP16.11■□□□□ 0.17
NUP54-205ENST00000507257 MEOX2P50222 304 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 EXOSC7Q15024 291 aaKnown RBP16.11■□□□□ 0.17
NUP54-205ENST00000507257 TSC22D1Q15714 1073 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 ALG11Q2TAA5 492 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 C2orf76Q3KRA6 126 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 EMC4Q5J8M3 183 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 YOD1Q5VVQ6 348 aaPredicted RBP16.11■□□□□ 0.17
NUP54-205ENST00000507257 JAZF1Q86VZ6 243 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 LRRC75AQ8NAA5 344 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 ZNF511Q8NB15 262 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 OR1S2Q8NGQ3 325 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 OR1J4Q8NGS1 313 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 SMARCD2Q92925 531 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 ZNF75AQ96N20 296 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 DCBLD2Q96PD2 775 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 SEMA6CQ9H3T2 930 aa16.11■□□□□ 0.17
NUP54-205ENST00000507257 ZNF230Q9UIE0 474 aaPredicted RBP16.11■□□□□ 0.17
NUP54-205ENST00000507257 BRCA2P51587 3418 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 F8VVB4 439 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 F8VWA3 439 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 SULT2B1O00204 365 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 CYR61O00622 381 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 CEBPBP17676 345 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 ALOX5APP20292 161 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 GRPRP30550 384 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 CASRP41180 1078 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 AKR1D1P51857 326 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 NAAAQ02083 359 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 ID2Q02363 134 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 ZNF614Q8N883 585 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 ZCCHC10Q8TBK6 192 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 ARSGQ96EG1 525 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 SCARF2Q96GP6 870 aaPredicted RBP16.1■□□□□ 0.17
NUP54-205ENST00000507257 HHIPL1Q96JK4 782 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 C4orf45Q96LM5 186 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 WDR76Q9H967 626 aa16.1■□□□□ 0.17
NUP54-205ENST00000507257 ZNF629Q9UEG4 869 aaPredicted RBP16.1■□□□□ 0.17
NUP54-205ENST00000507257 H0YC42 278 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 SNAPINO95295 136 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 IL2RAP01589 272 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 ITGA5P08648 1049 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 CT62P0C5K7 136 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 CD79AP11912 226 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 ADCYAP1P18509 176 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 SDHAP31040 664 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 PSG6Q00889 435 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 INPP5JQ15735 1006 aaPredicted RBP16.09■□□□□ 0.17
NUP54-205ENST00000507257 MANEAQ5SRI9 462 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 SKA3Q8IX90 412 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 OR1J2Q8NGS2 313 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 FLVCR1-AS1Q8TAF5 88 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 LCN9Q8WX39 176 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 MBD2Q9UBB5 411 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 PILRAQ9UKJ1 303 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 INSL6Q9Y581 213 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 KAT7O95251 611 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 NR0B1P51843 470 aaKnown RBP16.09■□□□□ 0.17
NUP54-205ENST00000507257 ARHGDIBP52566 201 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 KIR2DS3Q14952 304 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 PNLIPRP3Q17RR3 467 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 PRSS35Q8N3Z0 413 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 GLYATL2Q8WU03 294 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms