RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TXNL4AP83876 142 aaKnown RBP5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 ZNF154Q13106 437 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 PMS2P3Q13401 168 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 MELKQ14680 651 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 TBC1D28Q2M2D7 210 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 MMEL1Q495T6 779 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 GTDC1Q4AE62 458 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 ALG10BQ5I7T1 473 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 KLF17Q5JT82 389 aaPredicted RBP5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 CEP85LQ5SZL2 805 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 SPATA46Q5T0L3 261 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 C6orf89Q6UWU4 347 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 NUDCD3Q8IVD9 361 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 SLC22A24Q8N4F4 322 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 OR1J1Q8NGS3 322 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 ZNF519Q8TB69 540 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 SLC38A5Q8WUX1 472 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 GEMIN6Q8WXD5 167 aaKnown RBP5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 TMIGD2Q96BF3 282 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 MRI1Q9BV20 369 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 DENND2DQ9H6A0 471 aaPredicted RBP5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 PPCSQ9HAB8 311 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 SLC6A13Q9NSD5 602 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 DCAF16Q9NXF7 216 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 NKIRAS2Q9NYR9 191 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 PLEK2Q9NYT0 353 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 CALML5Q9NZT1 146 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 SELENONQ9NZV5 590 aa5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 PDP1Q9P0J1 537 aaPredicted RBP5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 SOX21Q9Y651 276 aaPredicted RBP5.84□□□□□ -1.47
NPIPB3-203ENST00000504841 TRAV40A0A0B4J280 105 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 IQCMA0A1B0GVH7 501 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 PLSCR5A0PG75 271 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 ZSCAN5BA6NJL1 495 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 MS4A18H0YCH9 400 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 FARS2O95363 451 aaKnown RBP5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 IGHV1-46P01743 117 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 IGHMP01871 453 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 SERPINE1P05121 402 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 BPGMP07738 259 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 ALDOCP09972 364 aaKnown RBP5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 MYZAPP0CAP1 466 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 IGHV4-38-2P0DP08 117 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 ZNF250P15622 560 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 IL12AP29459 219 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 GCH1P30793 250 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 MPV17P39210 176 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 MVDP53602 400 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 UCP2P55851 309 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 NCALDP61601 193 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 SEC61A1P61619 476 aaKnown RBP5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 PLP2Q04941 152 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 SLC3A1Q07837 685 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 PUDPQ08623 228 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 MS4A18Q3C1V0 323 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 SPRNQ5BIV9 151 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 TMEM53Q6P2H8 277 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 C5orf46Q6UWT4 87 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 WDR88Q6ZMY6 472 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 ZNF627Q7L945 461 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 SLC16A14Q7RTX9 510 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 PARP8Q8N3A8 854 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 KIR3DL3Q8N743 410 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 RBM15BQ8NDT2 890 aaKnown RBP5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 ADPRHL1Q8NDY3 354 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 OR4K5Q8NGD3 323 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 IPCEF1Q8WWN9 437 aaPredicted RBP5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 WFDC12Q8WWY7 111 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 MAL2Q969L2 176 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 UBE2FQ969M7 185 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 LRR1Q96L50 414 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 MOGAT1Q96PD6 335 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 ZIM3Q96PE6 472 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 ZBTB18Q99592 522 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 EPYCQ99645 322 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 EGLN1Q9GZT9 426 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 LRMDAQ9H2I8 198 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 TPT1P8Q9HAU6 139 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 NPHS2Q9NP85 383 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 TMEM38BQ9NVV0 291 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 GLTPQ9NZD2 209 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 ARMCX1Q9P291 453 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 OR5V1Q9UGF6 321 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 TRIM33Q9UPN9 1127 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 IFT52Q9Y366 437 aa5.83□□□□□ -1.48
NPIPB3-203ENST00000504841 A0A0G2JPF8 293 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 LOC102725191A0A1B0GVB3 256 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 HNRNPCL2B2RXH8 293 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 HNRNPCL3B7ZW38 293 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 C5orf58C9J3I9 102 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 TRAPPC2LH3BP13 241 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 CLDN34H7C241 214 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 M0QZ24 198 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 HOXA3O43365 443 aaPredicted RBP5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 HNRNPCL1O60812 293 aaKnown RBP5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 FZD7O75084 574 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 ENTPD5O75356 428 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 UBOX5O94941 541 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 OR6A2O95222 327 aa5.82□□□□□ -1.48
NPIPB3-203ENST00000504841 BGLAPP02818 100 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms