RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 RNF130Q86XS8 419 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 VRK2Q86Y07 508 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 OR8H2Q8N162 312 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 C17orf78Q8N4C9 275 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 ZNF781Q8N8C0 355 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 ZBTB8BQ8NAP8 495 aaPredicted RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 FAM71CQ8NEG0 241 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 C1orf162Q8NEQ5 155 aaPredicted RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 SYT3Q9BQG1 590 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 SUCNR1Q9BXA5 334 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 RAB1BQ9H0U4 201 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 DYNLRB1Q9NP97 96 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 DDX28Q9NUL7 540 aaKnown RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 RLIMQ9NVW2 624 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 HIF1ANQ9NWT6 349 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 TRAPPC4Q9Y296 219 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 NOTCH3Q9UM47 2321 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 FRAS1Q86XX4 4008 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 PRSS51A0A1B0GVH4 220 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 CFAP73A6NFT4 308 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 OR6C65A6NJZ3 312 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 LIPT2A6NK58 231 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 AQP7P3A6NL99 342 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 RNASET2O00584 256 aaKnown RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 BIRC5O15392 142 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ZNF208O43345 1280 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 FRS3O43559 492 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 DNPH1O43598 174 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 AKAP8O43823 692 aaKnown RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 AGR2O95994 175 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 PAHP00439 452 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 BPGMP07738 259 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ADRA2AP08913 450 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 NR2F1P10589 423 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 PRG2P13727 222 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 NCF2P19878 526 aaPredicted RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 NPR2P20594 1047 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 S100A3P33764 101 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ECI1P42126 302 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 CDKN2CP42773 168 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 SLC1A3P43003 542 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 RANBP1P43487 201 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 HTR3AP46098 478 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 CENPAP49450 140 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 UFM1P61960 85 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 IL13RA1P78552 427 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ARF1P84077 181 aaKnown RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 H3F3AP84243 136 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 HOXC5Q00444 222 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 HGFACQ04756 655 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 IFFO1Q0D2I5 559 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 SNTB2Q13425 540 aaKnown RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 SPCS2Q15005 226 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 CHI3L2Q15782 390 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ALKBH6Q3KRA9 238 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ANXA8L1Q5VT79 327 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 PRAMEF8Q5VWM4 474 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 PRAMEF7Q5VXH5 474 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 CARD17Q5XLA6 110 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 STEAP3Q658P3 488 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 LEG1Q6P5S2 330 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 SHQ1Q6PI26 577 aaKnown RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 PAQR6Q6TCH4 344 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ZNF836Q6ZNA1 936 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ZNF621Q6ZSS3 439 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 CREB3L2Q70SY1 520 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 SPATC1Q76KD6 591 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 NANOGNBQ7Z5D8 188 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 GLCCI1Q86VQ1 547 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 SPATA24Q86W54 205 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 EPHX4Q8IUS5 362 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 NUDCD3Q8IVD9 361 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 CDK20Q8IZL9 346 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 POMGNT2Q8NAT1 580 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ZNF540Q8NDQ6 660 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 OR52P1PQ8NH57 321 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 MRAPQ8TCY5 172 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 CKAP2Q8WWK9 683 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 C22orf15Q8WYQ4 148 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 BCL2L2Q92843 193 aaPredicted RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 TMEM45BQ96B21 275 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 TMEM186Q96B77 213 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 LRRC58Q96CX6 371 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 NEURL3Q96EH8 262 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 RBM14Q96PK6 669 aaKnown RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 PANX1Q96RD7 426 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 RBM4BQ9BQ04 359 aaKnown RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 KATNB1Q9BVA0 655 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 SSBP3Q9BWW4 388 aaPredicted RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 NUF2Q9BZD4 464 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 SLC38A1Q9H2H9 487 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 NELFAQ9H3P2 528 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 PLK3Q9H4B4 646 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 NCOR1P1Q9H4R4 102 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 PPCSQ9HAB8 311 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 CRLF2Q9HC73 371 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 EXOSC3Q9NQT5 275 aaKnown RBP4.74□□□□□ -1.65
SPTA1-209ENST00000498708 SEC14L4Q9UDX3 406 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 ATPIF1Q9UII2 106 aa4.74□□□□□ -1.65
SPTA1-209ENST00000498708 FZR1Q9UM11 496 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms