RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 HOMEZQ8IX15 550 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SLC35F2Q8IXU6 374 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 AMN1Q8IY45 258 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FAM71AQ8IYT1 594 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PNKDQ8N490 385 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PAQR4Q8N4S7 273 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 METTL27Q8N6F8 245 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 PCDH20Q8N6Y1 951 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 BHLHE23Q8NDY6 225 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WFDC9Q8NEX5 89 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR4A16Q8NH70 328 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SPATA22Q8NHS9 363 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CXorf40AQ8TE69 158 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CKAP2Q8WWK9 683 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NACC2Q96BF6 587 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ATG4CQ96DT6 458 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SGTBQ96EQ0 304 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 APOPT1Q96IL0 206 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF48Q96MX3 618 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 SPATA33Q96N06 139 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF347Q96SE7 839 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MESP1Q9BRJ9 268 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RTN4RQ9BZR6 473 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RACGAP1Q9H0H5 632 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SLC25A19Q9HC21 320 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 KMT5AQ9NQR1 393 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SMYD2Q9NRG4 433 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TUBG2Q9NRH3 451 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SLC7A10Q9NS82 523 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 HSFX1Q9UBD0 423 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SEC14L3Q9UDX4 400 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MIOXQ9UGB7 285 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PACSIN3Q9UKS6 424 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CARHSP1Q9Y2V2 147 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 PPIL1Q9Y3C6 166 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRPS16Q9Y3D3 137 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 ATG4BQ9Y4P1 393 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MAP2P11137 1827 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 FNDC1Q4ZHG4 1894 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 TRGV8A0A0C4DH27 118 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NDUFAF8A1L188 74 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CCDC151A5D8V7 595 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WIPF3A6NGB9 483 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LRRC3CA6NJW4 275 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ERVV-1B6SEH8 477 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ERVV-2B6SEH9 535 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 M0R129 80 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FMO6PO60774 539 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SOX30O94993 753 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CLDN9O95484 217 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SLC2A10O95528 541 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TMEM50AO95807 157 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ALDOAP04075 364 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 PLA2G4BP0C869 781 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF705BP0CI00 300 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 HSMCR30P0CW71 290 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ACKR3P25106 362 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NMT1P30419 496 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 HSD17B2P37059 387 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RXRGP48443 463 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FLT3LGP49771 235 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LUMP51884 338 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 ACLYP53396 1101 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF280AP59817 542 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 UBE2NP61088 152 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 EEF1A1P68104 462 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 BDH1Q02338 343 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SYPL1Q16563 259 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MICBQ29980 383 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 XKR7Q5GH72 579 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SOHLH1Q5JUK2 328 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SLC25A30Q5SVS4 291 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CATSPEREQ5SY80 951 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 EEF1A1P5Q5VTE0 462 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TIGD3Q6B0B8 471 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RBPMS2Q6ZRY4 209 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRPL21Q7Z2W9 205 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 DAZ4Q86SG3 579 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRGPRGQ86SM5 289 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LINC01551Q86U37 167 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GPR65Q8IYL9 337 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RCOR2Q8IZ40 523 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MYCT1Q8N699 235 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF680Q8NEM1 530 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR4L1Q8NH43 312 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR14L1PQ8NHC6 308 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 C16orf52Q8NHV5 167 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NT5CQ8TCD5 201 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ADAMTS17Q8TE56 1095 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WIPF2Q8TF74 440 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 DNAJB3Q8WWF6 145 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LINC01599Q8WXQ3 324 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FRAT1Q92837 279 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRPL24Q96A35 216 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 NTNG2Q96CW9 530 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WDR92Q96MX6 357 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CLUHP3Q96NS8 147 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ERGIC2Q96RQ1 377 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LINC01587Q99440 93 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FMO2Q99518 471 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms