RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	DVL2	O14641	736 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	CD8B	P10966	210 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	CDKN2A	P42771	156 aa	Known RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	SELENOP	P49908	381 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF133	P52736	654 aa	Predicted RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	CDH11	P55287	796 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	POU4F2	Q12837	409 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	HIST3H3	Q16695	136 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	NRN1L	Q496H8	165 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	C10orf128	Q5T292	105 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	PLBD1	Q6P4A8	553 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	CCDC71	Q8IV32	467 aa	Predicted RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	CPO	Q8IVL8	374 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	PROKR2	Q8NFJ6	384 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	FBLIM1	Q8WUP2	373 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	OTULIN	Q96BN8	352 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	IL4I1	Q96RQ9	567 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	DMRTA2	Q96SC8	542 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	MYCBP	Q99417	103 aa	Predicted RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	YTHDF1	Q9BYJ9	559 aa	Known RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	NMNAT2	Q9BZQ4	307 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	HINT3	Q9NQE9	182 aa	Known RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	RPRD1B	Q9NQG5	326 aa	Known RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	RASSF1	Q9NS23	344 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	SCN3B	Q9NY72	215 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	MALT1	Q9UDY8	824 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	WARS2	Q9UGM6	360 aa	Known RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	FOXD3	Q9UJU5	478 aa	Predicted RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	CLEC4A	Q9UMR7	237 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	OSGIN2	Q9Y236	505 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	GPR52	Q9Y2T5	361 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	RPL36	Q9Y3U8	105 aa	Known RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	SLC16A7	O60669	478 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	CLIC3	O95833	236 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	GNAO1	P09471	354 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	GABRB1	P18505	474 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	HTR1F	P30939	366 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	RPS7	P62081	194 aa	Known RBP	11.99	□□□□□ -0.49
APTX-231	ENST00000494973	SIRPA	P78324	504 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	TGFBR3	Q03167	851 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.99	□□□□□ -0.49
APTX-231	ENST00000494973	C1QTNF12	Q5T7M4	302 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	AADACL4	Q5VUY2	407 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	CARD17	Q5XLA6	110 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	FBXW9	Q5XUX1	488 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	SEM1	Q6ZVN7	128 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	ZBTB46	Q86UZ6	589 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	GCNT2	Q8N0V5	402 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF843	Q8N446	348 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	ASB5	Q8WWX0	329 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	DDO	Q99489	341 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	PLSCR4	Q9NRQ2	329 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF226	Q9NYT6	803 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	COQ3	Q9NZJ6	369 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	SH3BGRL2	Q9UJC5	107 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	PCDHGB1	Q9Y5G3	927 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	MED12L	Q86YW9	2145 aa		11.99	□□□□□ -0.49
APTX-231	ENST00000494973	FAM208B	Q5VWN6	2430 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	OR6C68	A6NDL8	312 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	RPL36A-HNRNPH2	H7BZ11	118 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	CCL21	O00585	134 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	ZNHIT1	O43257	154 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	DHH	O43323	396 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	TNFSF13	O75888	250 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	GLCE	O94923	617 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	SLC2A10	O95528	541 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	QDPR	P09417	244 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	CCDC159	P0C7I6	412 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	SPI1	P17947	270 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	NPR2	P20594	1047 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	KIR2DL2	P43627	348 aa	Predicted RBP	11.98	□□□□□ -0.49
APTX-231	ENST00000494973	PMPCA	Q10713	525 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	CDK5R2	Q13319	367 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	KLHL12	Q53G59	568 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	RBM48	Q5RL73	367 aa	Known RBP	11.98	□□□□□ -0.49
APTX-231	ENST00000494973	TFAP2E	Q6VUC0	442 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	BEND4	Q6ZU67	534 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	MEPCE	Q7L2J0	689 aa	Known RBP	11.98	□□□□□ -0.49
APTX-231	ENST00000494973	LSR	Q86X29	649 aa	Predicted RBP	11.98	□□□□□ -0.49
APTX-231	ENST00000494973	GLB1L2	Q8IW92	636 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	UBE2J2	Q8N2K1	259 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	SYT14	Q8NB59	555 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	CYB561A3	Q8NBI2	242 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	MCHR2	Q969V1	340 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	NMD3	Q96D46	503 aa	Known RBP	11.98	□□□□□ -0.49
APTX-231	ENST00000494973	LRRC46	Q96FV0	321 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF582	Q96NG8	517 aa	Predicted RBP	11.98	□□□□□ -0.49
APTX-231	ENST00000494973	BBC3	Q96PG8	261 aa	Predicted RBP	11.98	□□□□□ -0.49
APTX-231	ENST00000494973	MNT	Q99583	582 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	WAC	Q9BTA9	647 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	NUAK2	Q9H093	628 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	CCNB1IP1	Q9NPC3	277 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	PLCXD1	Q9NUJ7	323 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	HAO2	Q9NYQ3	351 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	KCNG2	Q9UJ96	466 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	TPRKB	Q9Y3C4	175 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	BSN	Q9UPA5	3926 aa		11.98	□□□□□ -0.49
APTX-231	ENST00000494973	EFCAB10	A6NFE3	127 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	FAM183A	A6NL82	134 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973		H7C1C5	153 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms