RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 YAP1P46937 504 aaKnown RBP8.28□□□□□ -1.08
MSH5-218ENST00000494646 PPOXP50336 477 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 SEC24CP53992 1094 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 RUNX1T1Q06455 604 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 MSMPQ1L6U9 139 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 LRRC23Q53EV4 343 aaPredicted RBP8.28□□□□□ -1.08
MSH5-218ENST00000494646 CYBRD1Q53TN4 286 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 GKAP1Q5VSY0 366 aaPredicted RBP8.28□□□□□ -1.08
MSH5-218ENST00000494646 IL17RELQ6ZVW7 336 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 PIWIL3Q7Z3Z3 882 aaKnown RBP8.28□□□□□ -1.08
MSH5-218ENST00000494646 NANOGNBQ7Z5D8 188 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 SLC22A24Q8N4F4 322 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 SYT14Q8NB59 555 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 PCYOX1LQ8NBM8 494 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 OR8J3Q8NGG0 315 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 MOSPD2Q8NHP6 518 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 TMEM239Q8WW34 195 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 MCHR2Q969V1 340 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 SLC25A44Q96H78 314 aaPredicted RBP8.28□□□□□ -1.08
MSH5-218ENST00000494646 SYT3Q9BQG1 590 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 BEX2Q9BXY8 128 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 MRPL37Q9BZE1 423 aaKnown RBP8.28□□□□□ -1.08
MSH5-218ENST00000494646 PCDHAC1Q9H158 963 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 OR51B6Q9H340 312 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 TPK1Q9H3S4 243 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 ZNF442Q9H7R0 627 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 CHODLQ9H9P2 273 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 DYNLRB1Q9NP97 96 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 C20orf141Q9NUB4 165 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 ZNF446Q9NWS9 450 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 RHCGQ9UBD6 479 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 DUSP13Q9UII6 198 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 BAG5Q9UL15 447 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 LOC100289279A0A1B0GTE1 492 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 A0A1W2PRG6 482 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 LRP5LA4QPB2 252 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 NDUFS8O00217 210 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 PIP5K1CO60331 668 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 LMX1BO60663 402 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 TRMUO75648 421 aaKnown RBP8.27□□□□□ -1.09
MSH5-218ENST00000494646 OR7A10O76100 309 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 UBL3O95164 117 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 NPPAP01160 153 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 PGA4P0DJD7 388 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 PGA3P0DJD8 388 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 OR8G3PP0DMU2 310 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 APEHP13798 732 aaKnown RBP8.27□□□□□ -1.09
MSH5-218ENST00000494646 FUT4P22083 530 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 GLRXP35754 106 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 CLRN1P58418 232 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 GALK2Q01415 458 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 RPL18Q07020 188 aaKnown RBP8.27□□□□□ -1.09
MSH5-218ENST00000494646 MAPRE2Q15555 327 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 ALKBH6Q3KRA9 238 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 COQ5Q5HYK3 327 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 ERICH5Q6P6B1 374 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 PODNL1Q6PEZ8 512 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 ZNF627Q7L945 461 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 MEX3DQ86XN8 651 aaKnown RBP8.27□□□□□ -1.09
MSH5-218ENST00000494646 ZNF584Q8IVC4 421 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 LRRC18Q8N456 261 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 OR4K5Q8NGD3 323 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 UBASH3BQ8TF42 649 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 RCN3Q96D15 328 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 MSI2Q96DH6 328 aaKnown RBP8.27□□□□□ -1.09
MSH5-218ENST00000494646 SGTBQ96EQ0 304 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 ZNF426Q9BUY5 554 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 SLC19A3Q9BZV2 496 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 BPESC1Q9GZL8 116 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 TMEM38BQ9NVV0 291 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 CMTM6Q9NX76 183 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 MYEF2Q9P2K5 600 aaKnown RBP8.27□□□□□ -1.09
MSH5-218ENST00000494646 SPEF1Q9Y4P9 236 aa8.27□□□□□ -1.09
MSH5-218ENST00000494646 ELOVL7A1L3X0 281 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 BBIP1A8MTZ0 92 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 MCIDASD6RGH6 385 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 J3KTA2 159 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 OR5F1O95221 314 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 FARS2O95363 451 aaKnown RBP8.26□□□□□ -1.09
MSH5-218ENST00000494646 TGFAP01135 160 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 IFNA2P01563 188 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 IFNA14P01570 189 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 IGHG1P01857 330 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 SERPINA5P05154 406 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 FAM157BP0CG42 384 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 IFI30P13284 250 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 ACADSP16219 412 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 COL8A2P25067 703 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 ALDH3B1P43353 468 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 GZMKP49863 264 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 SELENOWP63302 87 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 MAD2L1BPQ15013 274 aaPredicted RBP8.26□□□□□ -1.09
MSH5-218ENST00000494646 BRICD5Q6PL45 260 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 CXXC5Q7LFL8 322 aaKnown RBP8.26□□□□□ -1.09
MSH5-218ENST00000494646 SLC16A14Q7RTX9 510 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 VTCN1Q7Z7D3 282 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 MICU2Q8IYU8 434 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 PAQR4Q8N4S7 273 aaPredicted RBP8.26□□□□□ -1.09
MSH5-218ENST00000494646 OR2T12Q8NG77 320 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 NEU4Q8WWR8 484 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms