RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 CRMP1Q14194 572 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 SLC17A1Q14916 467 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 SPCS2Q15005 226 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 ACKR1Q16570 336 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 ARMCX4Q5H9R4 360 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 GPR139Q6DWJ6 353 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 BCDIN3DQ7Z5W3 292 aaKnown RBP10.08□□□□□ -0.8
SND1-212ENST00000485871 MEIOBQ8N635 442 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 ARIH2OSQ8N7S6 290 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 ZIC4Q8N9L1 334 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 NPEPL1Q8NDH3 523 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 ZPLD1Q8TCW7 415 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 RNF128Q8TEB7 428 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 ASB10Q8WXI3 467 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 PTP4A1Q93096 173 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 LGALS12Q96DT0 336 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 ZHX1-C8orf76Q96EF9 292 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 SNX18Q96RF0 628 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 SLX1AQ9BQ83 275 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 RHNO1Q9BSD3 238 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 NAA11Q9BSU3 229 aaPredicted RBP10.08□□□□□ -0.8
SND1-212ENST00000485871 HCAR1Q9BXC0 346 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 NMNAT2Q9BZQ4 307 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 NDEL1Q9GZM8 345 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 SLC25A18Q9H1K4 315 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 EXO5Q9H790 373 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 FGF20Q9NP95 211 aaPredicted RBP10.08□□□□□ -0.8
SND1-212ENST00000485871 DOPEY2Q9Y3R5 2298 aa10.08□□□□□ -0.8
SND1-212ENST00000485871 DOCK7Q96N67 2140 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 SHANK1Q9Y566 2161 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 TMEM129A0AVI4 362 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 OR14I1A6ND48 311 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 OR6C68A6NDL8 312 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 CCRL2O00421 344 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 ZNHIT1O43257 154 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 TLX2O43763 284 aaPredicted RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 VAMP5O95183 116 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 OR6A2O95222 327 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 PTHP01270 115 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 SCG5P05408 212 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 SLC2A5P22732 501 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 AHCYP23526 432 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 NOS3P29474 1203 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 RGS6P49758 472 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 RPS3AP61247 264 aaKnown RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 POU3F1Q03052 451 aaPredicted RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 SRYQ05066 204 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 RUNX1T1Q06455 604 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 MLLT11Q13015 90 aaPredicted RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 AQP6Q13520 282 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 MELKQ14680 651 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 ZNF846Q147U1 533 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 PRR30Q53SZ7 412 aaPredicted RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 PDSS1Q5T2R2 415 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 NXNL2Q5VZ03 156 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 FAM180AQ6UWF9 173 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 CREB3L2Q70SY1 520 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 SLC35D2Q76EJ3 337 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 ADCK1Q86TW2 530 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 GID4Q8IVV7 300 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 SDR9C7Q8NEX9 313 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 OR52E2Q8NGJ4 325 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 OR4K13Q8NH42 304 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 DYNC2LI1Q8TCX1 351 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 ROBO4Q8WZ75 1007 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 SARAFQ96BY9 339 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 SNRNP40Q96DI7 357 aaKnown RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 TXNDC15Q96J42 360 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 LRR1Q96L50 414 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 ZNF582Q96NG8 517 aaPredicted RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 MGLLQ99685 303 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 SF3B5Q9BWJ5 86 aaKnown RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 AMBNQ9NP70 447 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 MED29Q9NX70 200 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 PAQR5Q9NXK6 330 aaPredicted RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 DNAJC27Q9NZQ0 273 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 CCDC59Q9P031 241 aaKnown RBP10.07□□□□□ -0.8
SND1-212ENST00000485871 CLCF1Q9UBD9 225 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 KLHL21Q9UJP4 597 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 NOX1Q9Y5S8 564 aa10.07□□□□□ -0.8
SND1-212ENST00000485871 BSNQ9UPA5 3926 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 IGKV3D-15A0A087WSY6 115 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 A0A1W2PRG6 482 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 CCDC182A6NF36 153 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 FAM183AA6NL82 134 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 RIIAD1A6NNX1 92 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 CLDN25C9JDP6 229 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 SERPINI2O75830 405 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 AQP8O94778 261 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 INHBBP09529 407 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 CLUP10909 449 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 IFNGR1P15260 489 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 NTF4P34130 210 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 LIPAP38571 399 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 CAPZA2P47755 286 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 DBPQ10586 325 aaPredicted RBP10.06□□□□□ -0.8
SND1-212ENST00000485871 KLRB1Q12918 225 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 SPHARQ15513 63 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 C4orf17Q53FE4 359 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 FAM205BPQ63HN1 556 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms