RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 KRTAP24-1Q3LI83 254 aa18.54■□□□□ 0.56
USP40-215ENST00000484528 DEF8Q6ZN54 512 aa18.54■□□□□ 0.56
USP40-215ENST00000484528 PIWIL3Q7Z3Z3 882 aaKnown RBP18.54■□□□□ 0.56
USP40-215ENST00000484528 PFN4Q8NHR9 129 aa18.54■□□□□ 0.56
USP40-215ENST00000484528 SLC25A44Q96H78 314 aaPredicted RBP18.54■□□□□ 0.56
USP40-215ENST00000484528 SIKE1Q9BRV8 207 aa18.54■□□□□ 0.56
USP40-215ENST00000484528 OR51B6Q9H340 312 aa18.54■□□□□ 0.56
USP40-215ENST00000484528 TMEM38BQ9NVV0 291 aa18.54■□□□□ 0.56
USP40-215ENST00000484528 FXYD1O00168 92 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 DHHO43323 396 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 BCL10O95999 233 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 F13BP05160 661 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 QDPRP09417 244 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 TACSTD2P09758 323 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 OR8G3PP0DMU2 310 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 CCL2P13500 99 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 HNF1AP20823 631 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 LSP1P33241 339 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 UGT2B15P54855 530 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 CLRN1P58418 232 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 RPS23P62266 143 aaKnown RBP18.53■□□□□ 0.56
USP40-215ENST00000484528 RUNX1T1Q06455 604 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 RIN1Q13671 783 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 CYLC2Q14093 348 aaPredicted RBP18.53■□□□□ 0.56
USP40-215ENST00000484528 FXNQ16595 210 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 CCDC80Q76M96 950 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 NKAIN4Q8IVV8 208 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 PAQR4Q8N4S7 273 aaPredicted RBP18.53■□□□□ 0.56
USP40-215ENST00000484528 OR4K5Q8NGD3 323 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 ZNF347Q96SE7 839 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 SLC19A3Q9BZV2 496 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 DENND2DQ9H6A0 471 aaPredicted RBP18.53■□□□□ 0.56
USP40-215ENST00000484528 VIPAS39Q9H9C1 493 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 DUSP13Q9UII6 198 aa18.53■□□□□ 0.56
USP40-215ENST00000484528 HPXP02790 462 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 SERPINA5P05154 406 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 FAM157BP0CG42 384 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 TAS2R41P59536 307 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 RPL18Q07020 188 aaKnown RBP18.52■□□□□ 0.56
USP40-215ENST00000484528 ALKBH6Q3KRA9 238 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 METTL21CQ5VZV1 264 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 CALHM3Q86XJ0 350 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 SYT14Q8NB59 555 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 TMEM255BQ8WV15 326 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 RASSF5Q8WWW0 418 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 ECSITQ9BQ95 431 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 NARFLQ9H6Q4 476 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 RNF121Q9H920 327 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 SLC7A8Q9UHI5 535 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 FBXL3Q9UKT7 428 aa18.52■□□□□ 0.56
USP40-215ENST00000484528 A0A1W2PPW3 197 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 MCIDASD6RGH6 385 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 MRASO14807 208 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 SASH3O75995 380 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 FARS2O95363 451 aaKnown RBP18.51■□□□□ 0.55
USP40-215ENST00000484528 IGHG1P01857 330 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 OR1E2P47887 323 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 EVX1P49640 407 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 MMEL1Q495T6 779 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 ELFN2Q5R3F8 820 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 REP15Q6BDI9 236 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 SLC30A7Q8NEW0 376 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 NOXO1Q8NFA2 376 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 LRRC58Q96CX6 371 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 MS4A5Q9H3V2 200 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 C20orf141Q9NUB4 165 aa18.51■□□□□ 0.55
USP40-215ENST00000484528 ARGLU1Q9NWB6 273 aaPredicted RBP18.51■□□□□ 0.55
USP40-215ENST00000484528 A0A1W2PRG6 482 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 NCR1O76036 304 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 MT-ND1P03886 318 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 NAT2P11245 290 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 H2AFXP16104 143 aaPredicted RBP18.5■□□□□ 0.55
USP40-215ENST00000484528 FUT1P19526 365 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 AQP2P41181 271 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 PIN1Q13526 163 aaPredicted RBP18.5■□□□□ 0.55
USP40-215ENST00000484528 TMEM53Q6P2H8 277 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 OR8J3Q8NGG0 315 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 ASB10Q8WXI3 467 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 MCHR2Q969V1 340 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 SGTBQ96EQ0 304 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 CDH20Q9HBT6 801 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 BAG5Q9UL15 447 aa18.5■□□□□ 0.55
USP40-215ENST00000484528 PIP5K1CO60331 668 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 OR7A10O76100 309 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 CLPTM1O96005 669 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 COL8A2P25067 703 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 ERVS71-1P61550 626 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 KLF10Q13118 480 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 LRRC23Q53EV4 343 aaPredicted RBP18.49■□□□□ 0.55
USP40-215ENST00000484528 SLC16A14Q7RTX9 510 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 LRRC18Q8N456 261 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 LINC01356Q8N9X3 169 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 MOSPD2Q8NHP6 518 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 HPS1Q92902 700 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 SH3GL1Q99961 368 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 FGFR1OP2Q9NVK5 253 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 RIMS3Q9UJD0 308 aa18.49■□□□□ 0.55
USP40-215ENST00000484528 ENTPD5O75356 428 aa18.48■□□□□ 0.55
USP40-215ENST00000484528 OR5F1O95221 314 aa18.48■□□□□ 0.55
USP40-215ENST00000484528 SLC2A10O95528 541 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms