RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 FNDC8Q8TC99 324 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 HDAC2Q92769 488 aaKnown RBP18.28■□□□□ 0.52
SEC13-217ENST00000482647 RADILQ96JH8 1075 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 RBP7Q96R05 134 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 GPX7Q96SL4 187 aaPredicted RBP18.28■□□□□ 0.52
SEC13-217ENST00000482647 FOXB1Q99853 325 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 LIME1Q9H400 295 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 CCM2LQ9NUG4 571 aaPredicted RBP18.28■□□□□ 0.52
SEC13-217ENST00000482647 ENTPD5O75356 428 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 SEC14L2O76054 403 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 CD40P25942 277 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 GSSP48637 474 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 ZNF84P51523 738 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 PPP1R8Q12972 351 aaKnown RBP18.27■□□□□ 0.52
SEC13-217ENST00000482647 TSPAN31Q12999 210 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 MICAQ29983 383 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 RFX4Q33E94 735 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 THEM4Q5T1C6 240 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 PAPD5Q8NDF8 572 aaKnown RBP18.27■□□□□ 0.52
SEC13-217ENST00000482647 ZNF519Q8TB69 540 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 FANK1Q8TC84 345 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 KCNK17Q96T54 332 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 UBTD1Q9HAC8 227 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 SMURF2Q9HAU4 748 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 NRIP3Q9NQ35 241 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 ST6GALNAC2Q9UJ37 374 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 MGAT4BQ9UQ53 548 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 ADAM18Q9Y3Q7 739 aa18.27■□□□□ 0.52
SEC13-217ENST00000482647 PRR14LQ5THK1 2151 aa18.27■□□□□ 0.51
SEC13-217ENST00000482647 XKRYO14609 159 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 ABCD4O14678 606 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 ARHGEF9O43307 516 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 FKBP6O75344 327 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 CIB2O75838 187 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 PLAUP00749 431 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 GASTP01350 101 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 B4GALT1P15291 398 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 CAPZA2P47755 286 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 ERFP50548 548 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 ZNF133P52736 654 aaPredicted RBP18.26■□□□□ 0.51
SEC13-217ENST00000482647 MYBPC1Q00872 1141 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 CD47Q08722 323 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 GPR139Q6DWJ6 353 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 ZNF770Q6IQ21 691 aaPredicted RBP18.26■□□□□ 0.51
SEC13-217ENST00000482647 PAMR1Q6UXH9 720 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 THSD4Q6ZMP0 1018 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 DEPDC4Q8N2C3 294 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 FAM169BQ8N8A8 192 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 OR9Q2Q8NGE9 314 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 NINJ1Q92982 152 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 TMEM38BQ9NVV0 291 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 VNN3Q9NY84 501 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 IL20RAQ9UHF4 553 aa18.26■□□□□ 0.51
SEC13-217ENST00000482647 AHCYL1O43865 530 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 FARS2O95363 451 aaKnown RBP18.25■□□□□ 0.51
SEC13-217ENST00000482647 OR8G3PP0DMU2 310 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 CBR1P16152 277 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 DNASE1P24855 282 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 SLC6A6P31641 620 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 RPS6KA3P51812 740 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 FXYD6P3P58550 94 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 TUBA1BP68363 451 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 TUBA4AP68366 448 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 NRN1LQ496H8 165 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 C10orf128Q5T292 105 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 ADAM5Q6NVV9 412 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 C20orf204Q6ZNR8 217 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 TUBA1AQ71U36 451 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 FAM122BQ7Z309 247 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 SLC22A24Q8N4F4 322 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 AQP11Q8NBQ7 271 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 NANOS1Q8WY41 292 aaKnown RBP18.25■□□□□ 0.51
SEC13-217ENST00000482647 AKAP1Q92667 903 aaKnown RBP eCLIP18.25■□□□□ 0.51
SEC13-217ENST00000482647 SLCO4A1Q96BD0 722 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 NMD3Q96D46 503 aaKnown RBP18.25■□□□□ 0.51
SEC13-217ENST00000482647 Q96M85 177 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 ZNF570Q96NI8 536 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 OR52D1Q9H346 318 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 DNAJB9Q9UBS3 223 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 IER3IP1Q9Y5U9 82 aa18.25■□□□□ 0.51
SEC13-217ENST00000482647 RAF1P04049 648 aa18.24■□□□□ 0.51
SEC13-217ENST00000482647 APEHP13798 732 aaKnown RBP18.24■□□□□ 0.51
SEC13-217ENST00000482647 SDHAP31040 664 aa18.24■□□□□ 0.51
SEC13-217ENST00000482647 ARR3P36575 388 aa18.24■□□□□ 0.51
SEC13-217ENST00000482647 KEAP1Q14145 624 aa18.24■□□□□ 0.51
SEC13-217ENST00000482647 C3orf36Q3SXR2 165 aa18.24■□□□□ 0.51
SEC13-217ENST00000482647 RPL13AP3Q6NVV1 102 aa18.24■□□□□ 0.51
SEC13-217ENST00000482647 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
SEC13-217ENST00000482647 NSMAFQ92636 917 aa18.24■□□□□ 0.51
SEC13-217ENST00000482647 CRNNQ9UBG3 495 aaPredicted RBP18.24■□□□□ 0.51
SEC13-217ENST00000482647 PLEKHA6Q9Y2H5 1048 aa18.24■□□□□ 0.51
SEC13-217ENST00000482647 AKAP6Q13023 2319 aa18.24■□□□□ 0.51
SEC13-217ENST00000482647 ANKRD17O75179 2603 aaKnown RBP18.24■□□□□ 0.51
SEC13-217ENST00000482647 TEX13CA0A0J9YWL9 993 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 HS3ST1O14792 307 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 MGRN1O60291 552 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 E2F6O75461 281 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 SLC2A10O95528 541 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 HLA-HP01893 362 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 CD79AP11912 226 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms