RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, human

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4B-208	ENST00000480340	CPO	Q8IVL8	374 aa		12.8	□□□□□ -0.36
DENND4B-208	ENST00000480340	ZNF527	Q8NB42	609 aa		12.8	□□□□□ -0.36
DENND4B-208	ENST00000480340	ARHGDIG	Q99819	225 aa		12.8	□□□□□ -0.36
DENND4B-208	ENST00000480340	ZNF416	Q9BWM5	594 aa		12.8	□□□□□ -0.36
DENND4B-208	ENST00000480340	ZNF700	Q9H0M5	742 aa		12.8	□□□□□ -0.36
DENND4B-208	ENST00000480340	SCP2D1	Q9UJQ7	156 aa		12.8	□□□□□ -0.36
DENND4B-208	ENST00000480340	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.8	□□□□□ -0.36
DENND4B-208	ENST00000480340	MRPS18B	Q9Y676	258 aa	Known RBP	12.8	□□□□□ -0.36
DENND4B-208	ENST00000480340	SLC22A23	A1A5C7	686 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340		J3QRE1	110 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	GKN3P	P0CG01	181 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	RAB3A	P20336	220 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	ABCD3	P28288	659 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	IL12B	P29460	328 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	ARL9	Q6T311	187 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	NLRC3	Q7RTR2	1065 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	PRSS45	Q7RTY3	260 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	PPP1R32	Q7Z5V6	425 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	TOMM5	Q8N4H5	51 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	OR2T35	Q8NGX2	323 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	SMAP2	Q8WU79	429 aa	Predicted RBP	12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	THAP4	Q8WY91	577 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	ZFP3	Q96NJ6	502 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	METTL17	Q9H7H0	456 aa	Predicted RBP	12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	PCDHB16	Q9NRJ7	776 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	FLVCR2	Q9UPI3	526 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	BAIAP2	Q9UQB8	552 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	MRPS7	Q9Y2R9	242 aa	Known RBP	12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	FREM2	Q5SZK8	3169 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	NPIPB9	F8W1W9	429 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	RGS11	O94810	467 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	IGHE	P01854	428 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	THY1	P04216	161 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	HTR1F	P30939	366 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	EIPR1	Q53HC9	387 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	NHLRC3	Q5JS37	347 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	FTMT	Q8N4E7	242 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	IL22RA1	Q8N6P7	574 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	GATS	Q8NAP1	163 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	OR13C5	Q8NGS8	318 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	DIO2	Q92813	273 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	PMM1	Q92871	262 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	WDR89	Q96FK6	387 aa	Predicted RBP	12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	ERMAP	Q96PL5	475 aa	Predicted RBP	12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	HCAR1	Q9BXC0	346 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	ZNF160	Q9HCG1	818 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	MED9	Q9NWA0	146 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	NKIRAS2	Q9NYR9	191 aa		12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	MRTO4	Q9UKD2	239 aa	Known RBP	12.79	□□□□□ -0.36
DENND4B-208	ENST00000480340	PCSK5	Q92824	1860 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	NSG1	A0A0A6YYJ2	146 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	CDHR4	A6H8M9	788 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	TMEM200C	A6NKL6	621 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	T	O15178	435 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	SSNA1	O43805	119 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	ZNF354A	O60765	605 aa	Predicted RBP	12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	ZFAND5	O76080	213 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	UTS2	O95399	124 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	H2AFB2	P0C5Z0	115 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	FUT1	P19526	365 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	POU3F2	P20265	443 aa	Predicted RBP	12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	PSMD4	P55036	377 aa	Known RBP	12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	PLAUR	Q03405	335 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	SSPN	Q14714	243 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	ZNF141	Q15928	474 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	PGGHG	Q32M88	737 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	HSD17B12	Q53GQ0	312 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	RPTN	Q6XPR3	784 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340		Q6ZTK2	550 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	TMPRSS7	Q7RTY8	843 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	LINC00471	Q8N535	108 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	C17orf47	Q8NEP4	570 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	NUBPL	Q8TB37	319 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	CNOT9	Q92600	299 aa	Known RBP	12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	RFK	Q969G6	155 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	IMMP1L	Q96LU5	166 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	DDO	Q99489	341 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	USB1	Q9BQ65	265 aa	Known RBP	12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	ALG8	Q9BVK2	526 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	DEFB126	Q9BYW3	111 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	AUNIP	Q9H7T9	357 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	MRPL15	Q9P015	296 aa	Known RBP	12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	PRELID3B	Q9Y3B1	194 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	DCDC2B	A2VCK2	349 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	ZNF98	A6NK75	572 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	CDC42EP2	O14613	210 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	ICOSLG	O75144	302 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	GUSB	P08236	651 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	PRG2	P13727	222 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	TGIF1	Q15583	401 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	NDUFAF6	Q330K2	333 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	TMEM255A	Q5JRV8	349 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	PYHIN1	Q6K0P9	492 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	IZUMO1	Q8IYV9	350 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	OR5L2	Q8NGL0	311 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	ST8SIA2	Q92186	375 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	KLHL1	Q9NR64	748 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	BABAM2	Q9NXR7	383 aa		12.78	□□□□□ -0.36
DENND4B-208	ENST00000480340	COPS3	Q9UNS2	423 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms