RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 GPR4P46093 362 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 GSSP48637 474 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 CTXN1P60606 82 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 TESK1Q15569 626 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF672Q499Z4 452 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-217ENST00000479161 HIKESHIQ53FT3 197 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 OR2T5Q6IEZ7 315 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 ZER1Q7Z7L7 766 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 ADGRG5Q8IZF4 528 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 DEPDC4Q8N2C3 294 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 PAPD5Q8NDF8 572 aaKnown RBP13.51□□□□□ -0.25
C9orf3-217ENST00000479161 NOXO1Q8NFA2 376 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 OR13C2Q8NGS9 318 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 OR2T29Q8NH02 315 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF519Q8TB69 540 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 MCHR2Q969V1 340 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 CCDC124Q96CT7 223 aaKnown RBP13.51□□□□□ -0.25
C9orf3-217ENST00000479161 FAM46AQ96IP4 442 aaKnown RBP13.51□□□□□ -0.25
C9orf3-217ENST00000479161 KATNB1Q9BVA0 655 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 NRIP3Q9NQ35 241 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 B3GNT2Q9NY97 397 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 AKAP9Q99996 3911 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 TRAV27A0A087WT01 109 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 TCRBV3S1A0A5B6 114 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 DHRS12A0PJE2 317 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 SHISA9B4DS77 424 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 IMPA2O14732 288 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 TXNDC12O95881 172 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 QDPRP09417 244 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 CDH2P19022 906 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-217ENST00000479161 IST1P53990 364 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 CLRN1P58418 232 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 TSPAN31Q12999 210 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 KEAP1Q14145 624 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 FLOT2Q14254 428 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 MELKQ14680 651 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 CARD17Q5XLA6 110 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 SPNS3Q6ZMD2 512 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 DPY19L2P2Q6ZN68 376 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 FAM122BQ7Z309 247 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 LRRC75A-AS1Q8N1F1 130 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 OR4C15Q8NGM1 316 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 OR52J3Q8NH60 311 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 LILRB1Q8NHL6 650 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-217ENST00000479161 NANOS1Q8WY41 292 aaKnown RBP13.5□□□□□ -0.25
C9orf3-217ENST00000479161 RBP7Q96R05 134 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 LRMDAQ9H2I8 198 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 LIME1Q9H400 295 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 YY1AP1Q9H869 796 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 TMEM38BQ9NVV0 291 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 SLC7A8Q9UHI5 535 aa13.5□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF346Q9UL40 294 aaKnown RBP13.5□□□□□ -0.25
C9orf3-217ENST00000479161 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-217ENST00000479161 ARRDC5A6NEK1 342 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 UNC119BA6NIH7 251 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 TNFRSF11BO00300 401 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 ABCD4O14678 606 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 ARPC3O15145 178 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 IDH3BO43837 385 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 OR10H3O60404 316 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 OR8G3PP0DMU2 310 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF26P17031 533 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-217ENST00000479161 NPR2P20594 1047 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF83P51522 516 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF84P51523 738 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 MRPS34P82930 218 aaKnown RBP13.49□□□□□ -0.25
C9orf3-217ENST00000479161 RUNX1T1Q06455 604 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 FOXD4Q12950 439 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF770Q6IQ21 691 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-217ENST00000479161 RPL13AP3Q6NVV1 102 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 SMARCD3Q6STE5 483 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF813Q6ZN06 617 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 GNPDA2Q8TDQ7 276 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 CANT1Q8WVQ1 401 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 AKAP1Q92667 903 aaKnown RBP eCLIP13.49□□□□□ -0.25
C9orf3-217ENST00000479161 NRGNQ92686 78 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 HDAC2Q92769 488 aaKnown RBP13.49□□□□□ -0.25
C9orf3-217ENST00000479161 FBXW5Q969U6 566 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 RSRC1Q96IZ7 334 aaKnown RBP13.49□□□□□ -0.25
C9orf3-217ENST00000479161 SLC38A2Q96QD8 506 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 SNX18Q96RF0 628 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 WACQ9BTA9 647 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 CHID1Q9BWS9 393 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 CCM2LQ9NUG4 571 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-217ENST00000479161 GRHPRQ9UBQ7 328 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 RTTNQ86VV8 2226 aa13.49□□□□□ -0.25
C9orf3-217ENST00000479161 ITPR3Q14573 2671 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 A0A096LPE4 126 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 A0A1W2PPZ6 126 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 UBL3O95164 117 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 FARS2O95363 451 aaKnown RBP13.48□□□□□ -0.25
C9orf3-217ENST00000479161 PLAUP00749 431 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 DANCRP0C864 163 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 SDHAP31040 664 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 RPL4P36578 427 aaKnown RBP13.48□□□□□ -0.25
C9orf3-217ENST00000479161 ACVR1BP36896 505 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 FXYD6P3P58550 94 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 MICAQ29983 383 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 DEFB113Q30KQ7 82 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 RFX4Q33E94 735 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms