RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 IL20Q9NYY1 176 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 ADAM18Q9Y3Q7 739 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 SPG11Q96JI7 2443 aa23.49■■□□□ 1.35
CCM2-211ENST00000478582 ANKRD17O75179 2603 aaKnown RBP23.48■■□□□ 1.35
CCM2-211ENST00000478582 ZNF99A8MXY4 864 aaPredicted RBP23.48■■□□□ 1.35
CCM2-211ENST00000478582 TXNDC12O95881 172 aa23.48■■□□□ 1.35
CCM2-211ENST00000478582 HOXB1P14653 301 aaPredicted RBP23.48■■□□□ 1.35
CCM2-211ENST00000478582 SLC6A6P31641 620 aa23.48■■□□□ 1.35
CCM2-211ENST00000478582 ARF1P84077 181 aaKnown RBP23.48■■□□□ 1.35
CCM2-211ENST00000478582 ANKRD16Q6P6B7 361 aa23.48■■□□□ 1.35
CCM2-211ENST00000478582 FNDC8Q8TC99 324 aa23.48■■□□□ 1.35
CCM2-211ENST00000478582 PYDC1Q8WXC3 89 aa23.48■■□□□ 1.35
CCM2-211ENST00000478582 BCL2L2Q92843 193 aaPredicted RBP23.48■■□□□ 1.35
CCM2-211ENST00000478582 GTPBP3Q969Y2 492 aaKnown RBP23.48■■□□□ 1.35
CCM2-211ENST00000478582 NMD3Q96D46 503 aaKnown RBP23.48■■□□□ 1.35
CCM2-211ENST00000478582 ZC3HAV1LQ96H79 300 aaKnown RBP23.48■■□□□ 1.35
CCM2-211ENST00000478582 SLC17A5Q9NRA2 495 aa23.48■■□□□ 1.35
CCM2-211ENST00000478582 IL20RAQ9UHF4 553 aa23.48■■□□□ 1.35
CCM2-211ENST00000478582 CDH10Q9Y6N8 788 aa23.48■■□□□ 1.35
CCM2-211ENST00000478582 OTOGQ6ZRI0 2925 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 ALPK2Q86TB3 2170 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 IMPA2O14732 288 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 ARPC3O15145 178 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 AHCYL1O43865 530 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 QDPRP09417 244 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 NR2C1P13056 603 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 ANXA8P13928 327 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 SDHAP31040 664 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 RPS6KA3P51812 740 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 WDR31Q8NA23 367 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 OR5K1Q8NHB7 308 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 LRTOMTQ8WZ04 291 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 NRGNQ92686 78 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 MCHR2Q969V1 340 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 MUCL1Q96DR8 90 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 SAMD8Q96LT4 415 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 Q96M85 177 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 NIPSNAP1Q9BPW8 284 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 SLC25A15Q9Y619 301 aa23.47■■□□□ 1.35
CCM2-211ENST00000478582 CDH2P19022 906 aaPredicted RBP23.46■■□□□ 1.35
CCM2-211ENST00000478582 PPA1Q15181 289 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 SEZ6L2Q6UXD5 910 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 CDC20BQ86Y33 519 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 HS3ST5Q8IZT8 346 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 SYT14Q8NB59 555 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 CCDC168Q8NDH2 2452 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 ZNF570Q96NI8 536 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 NELFAQ9H3P2 528 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 EGLN3Q9H6Z9 239 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 SMURF2Q9HAU4 748 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 OBP2BQ9NPH6 170 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 POFUT2Q9Y2G5 429 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 AMDHD2Q9Y303 409 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 IER3IP1Q9Y5U9 82 aa23.46■■□□□ 1.35
CCM2-211ENST00000478582 H3BNX3 289 aa23.45■■□□□ 1.34
CCM2-211ENST00000478582 DHHO43323 396 aa23.45■■□□□ 1.34
CCM2-211ENST00000478582 IDH3BO43837 385 aa23.45■■□□□ 1.34
CCM2-211ENST00000478582 TP53P04637 393 aaPredicted RBP23.45■■□□□ 1.34
CCM2-211ENST00000478582 TBRG1Q3YBR2 411 aa23.45■■□□□ 1.34
CCM2-211ENST00000478582 MESTQ5EB52 335 aa23.45■■□□□ 1.34
CCM2-211ENST00000478582 THEM4Q5T1C6 240 aa23.45■■□□□ 1.34
CCM2-211ENST00000478582 C10orf128Q5T292 105 aa23.45■■□□□ 1.34
CCM2-211ENST00000478582 CENPNQ96H22 339 aaPredicted RBP23.45■■□□□ 1.34
CCM2-211ENST00000478582 RBP7Q96R05 134 aa23.45■■□□□ 1.34
CCM2-211ENST00000478582 NGBQ9NPG2 151 aa23.45■■□□□ 1.34
CCM2-211ENST00000478582 ARPC4-TTLL3A0A0A6YYG9 625 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 DEFB108AA8MXU0 73 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 ARHGEF9O43307 516 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 PPP1R3DO95685 299 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 PRKACGP22612 351 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 PAX7P23759 505 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 TESK1Q15569 626 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 HIKESHIQ53FT3 197 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 FBXW10Q5XX13 1052 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 AMIGO2Q86SJ2 522 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 HIPK1Q86Z02 1210 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 WFDC8Q8IUA0 241 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 OR52L1Q8NGH7 329 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 ERMAPQ96PL5 475 aaPredicted RBP23.44■■□□□ 1.34
CCM2-211ENST00000478582 FOXB1Q99853 325 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 IFT27Q9BW83 186 aa23.44■■□□□ 1.34
CCM2-211ENST00000478582 MAGED1Q9Y5V3 778 aaPredicted RBP23.44■■□□□ 1.34
CCM2-211ENST00000478582 TEX13CA0A0J9YWL9 993 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 XKRYO14609 159 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 ENTPD5O75356 428 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 HOXC12P31275 282 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 MYBPC1Q00872 1141 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 KRR1Q13601 381 aaKnown RBP23.43■■□□□ 1.34
CCM2-211ENST00000478582 SLC25A47Q6Q0C1 308 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 KLHL17Q6TDP4 642 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 ADCK1Q86TW2 530 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 CCDC36Q8IYA8 594 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 OR52N5Q8NH56 324 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 DNAJC9Q8WXX5 260 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 RASD2Q96D21 266 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 PLA2G12AQ9BZM1 189 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 ZNF556Q9HAH1 456 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 REV1Q9UBZ9 1251 aa23.43■■□□□ 1.34
CCM2-211ENST00000478582 SLC22A23A1A5C7 686 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 PRSS37A4D1T9 235 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms