RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 C10orf105Q8TEF2 133 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 MCHR2Q969V1 340 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 DOK1Q99704 481 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 SMURF2Q9HAU4 748 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 TMEM129A0AVI4 362 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 VSTM5A8MXK1 200 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 F13BP05160 661 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 QDPRP09417 244 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 ACADSP16219 412 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 NPR2P20594 1047 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 THBS4P35443 961 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 CAPZA2P47755 286 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 PSME3P61289 254 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 LSM11P83369 360 aaKnown RBP eCLIP20.25■□□□□ 0.83
C9orf3-215ENST00000478473 PRKCDQ05655 676 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 FHL1Q13642 323 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 TSEN54Q7Z6J9 526 aaKnown RBP20.25■□□□□ 0.83
C9orf3-215ENST00000478473 ZNF525Q8N782 197 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 FAM156AQ8NDB6 213 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 NOXO1Q8NFA2 376 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 MOSPD2Q8NHP6 518 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 BPIFA2Q96DR5 249 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 MS4A3Q96HJ5 214 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 SORCS2Q96PQ0 1159 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 NSRP1Q9H0G5 558 aaKnown RBP20.25■□□□□ 0.83
C9orf3-215ENST00000478473 ANKRD19PQ9H560 264 aa20.25■□□□□ 0.83
C9orf3-215ENST00000478473 GMNCA6NCL1 334 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 TRMUO75648 421 aaKnown RBP20.24■□□□□ 0.83
C9orf3-215ENST00000478473 IGHMP01871 453 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 SERPINA5P05154 406 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 CD79AP11912 226 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 GIPRP48546 466 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 EVX1P49640 407 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 TRAM2Q15035 370 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 ZNF584Q8IVC4 421 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 LRRC75AQ8NAA5 344 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 MAPK1IP1LQ8NDC0 245 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 FGFBP3Q8TAT2 258 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 ACOT11Q8WXI4 607 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-215ENST00000478473 KCTD14Q9BQ13 255 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-215ENST00000478473 TXNIPQ9H3M7 391 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 MYOZ1Q9NP98 299 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-215ENST00000478473 SPAG4Q9NPE6 437 aa20.24■□□□□ 0.83
C9orf3-215ENST00000478473 J3KTA2 159 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 NDUFS8O00217 210 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 GSTA4O15217 222 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 TLX2O43763 284 aaPredicted RBP20.23■□□□□ 0.83
C9orf3-215ENST00000478473 PIP5K1CO60331 668 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 SERPINA1P01009 418 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 GLRXP35754 106 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 PIGFQ07326 219 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 DAG1Q14118 895 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 LAPTM4AQ15012 233 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 FAM168AQ92567 244 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 HTRA1Q92743 480 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 HSH2DQ96JZ2 352 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 ZNF347Q96SE7 839 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 KCNK17Q96T54 332 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 FNDC11Q9BVV2 318 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 FKBP7Q9Y680 259 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 ENPP4Q9Y6X5 453 aa20.23■□□□□ 0.83
C9orf3-215ENST00000478473 A0A087WUU8 490 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 VWC2LB2RUY7 222 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 CD5LO43866 347 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 FARS2O95363 451 aaKnown RBP20.22■□□□□ 0.83
C9orf3-215ENST00000478473 RAB36O95755 333 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 ZNF682O95780 498 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 IGFBP1P08833 259 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-215ENST00000478473 IFI30P13284 250 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 MAKP20794 623 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 PTDSS1P48651 473 aaKnown RBP20.22■□□□□ 0.83
C9orf3-215ENST00000478473 CLRN1P58418 232 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 SNTB2Q13425 540 aaKnown RBP20.22■□□□□ 0.83
C9orf3-215ENST00000478473 ALG10Q5BKT4 473 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 VHLLQ6RSH7 139 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 TMPRSS11FQ6ZWK6 438 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 PIGWQ7Z7B1 504 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 NRMQ8IXM6 262 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 SPEF1Q9Y4P9 236 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 JMJD1CQ15652 2540 aa20.22■□□□□ 0.83
C9orf3-215ENST00000478473 INAFM1C9JVW0 142 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 MCIDASD6RGH6 385 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 NR2C1P13056 603 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 YAP1P46937 504 aaKnown RBP20.21■□□□□ 0.83
C9orf3-215ENST00000478473 SLC9A3P48764 834 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 MRPS34P82930 218 aaKnown RBP20.21■□□□□ 0.83
C9orf3-215ENST00000478473 MBOAT2Q6ZWT7 520 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 CPLX4Q7Z7G2 160 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 FNDC8Q8TC99 324 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 HDAC2Q92769 488 aaKnown RBP20.21■□□□□ 0.83
C9orf3-215ENST00000478473 TNFRSF13CQ96RJ3 184 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 ALG12Q9BV10 488 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 NMNAT1Q9HAN9 279 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-215ENST00000478473 DCAF13Q9NV06 445 aaKnown RBP20.21■□□□□ 0.83
C9orf3-215ENST00000478473 RPS6KA6Q9UK32 745 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 CMAHPQ9Y471 501 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 UGT2A1Q9Y4X1 527 aa20.21■□□□□ 0.83
C9orf3-215ENST00000478473 SONP18583 2426 aaKnown RBP20.21■□□□□ 0.83
C9orf3-215ENST00000478473 hCG_2039718K7EN88 272 aa20.2■□□□□ 0.82
C9orf3-215ENST00000478473 MMP7P09237 267 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms