RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ALG10BQ5I7T1 473 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 MFSD14CQ5VZR4 134 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 AWAT2Q6E213 333 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 TRIM40Q6P9F5 258 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 THOC6Q86W42 341 aaKnown RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 GABRG1Q8N1C3 465 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ZNF664Q8N3J9 261 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ACBD7Q8N6N7 88 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ZNF283Q8N7M2 679 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ZFP41Q8N8Y5 198 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CLEC18CQ8NCF0 446 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 OR13C3Q8NGS6 347 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 COQ8AQ8NI60 647 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 GHSRQ92847 366 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 PHF21AQ96BD5 680 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 SLC25A36Q96CQ1 311 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 SLC41A2Q96JW4 573 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 PIGQQ9BRB3 760 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 SNHG12Q9BXW3 62 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ZNF350Q9GZX5 532 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 TOLLIPQ9H0E2 274 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 GSX1Q9H4S2 264 aaPredicted RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 IMPAD1Q9NX62 359 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CLDND1Q9NY35 253 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 KCNK6Q9Y257 313 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 WDR87Q6ZQQ6 2873 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 DCHS1Q96JQ0 3298 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 OR52A4PA6NMU1 304 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ZNF726A6NNF4 738 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ZNF879B4DU55 563 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 EREGO14944 169 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ARPC3O15145 178 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 OR1F1O43749 312 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 C1orf105O95561 183 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 DUS4LO95620 317 aaKnown RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 PLATP00750 562 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 IGHMP01871 453 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CSTBP04080 98 aaKnown RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 ISG15P05161 165 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CSF1P09603 554 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 OR2T7P0C7T2 308 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CKBP12277 381 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 VAMP1P23763 118 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 FCARP24071 287 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 RBM34P42696 430 aaKnown RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 ALDH3B1P43353 468 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 EFNB2P52799 333 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 RPS20P60866 119 aaKnown RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 GANABQ14697 944 aaKnown RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 ZNF791Q3KP31 576 aaPredicted RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 GDF6Q6KF10 455 aaPredicted RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 LCTLQ6UWM7 567 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 STAC2Q6ZMT1 411 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ZNF295-AS1Q8N0V1 137 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 NLGN1Q8N2Q7 840 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 BHLHE23Q8NDY6 225 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 GPR156Q8NFN8 814 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 OR13C5Q8NGS8 318 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 OR2T27Q8NH04 317 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 OR4C6Q8NH72 309 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 OIT3Q8WWZ8 545 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 LINC01599Q8WXQ3 324 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CCDC74AQ96AQ1 378 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CTHRC1Q96CG8 243 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 TPD52L3Q96J77 140 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 APOLD1Q96LR9 279 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 SPATA33Q96N06 139 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 AGMATQ9BSE5 352 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 EBPLQ9BY08 206 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 NEUROD4Q9HD90 331 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 TRIOO75962 3097 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 A0A1W2PN81 502 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 RNASEK-C17orf49H0YIS7 233 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 DNAJB6O75190 326 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 SLC25A14O95258 325 aaPredicted RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 MT-ND5P03915 603 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ANXA5P08758 320 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CXCL1P09341 107 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ALPIP09923 528 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 SFTA3P0C7M3 94 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 LAMP2P13473 410 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CELP19835 753 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 APOBEC3AP31941 199 aaPredicted RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 CHRNA7P36544 502 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ACAA2P42765 397 aaKnown RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 CRATP43155 626 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 RPIAP49247 311 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ARPP19P56211 112 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 PSMA6P60900 246 aaKnown RBP3.69□□□□□ -1.82
USP16-205ENST00000474835 ACTC1P68032 377 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ACTA1P68133 377 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 DLK1P80370 383 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 NHLH2Q02577 135 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ROM1Q03395 351 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CXCL9Q07325 125 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 PEA15Q15121 130 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 ARHGAP11BQ3KRB8 267 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CHRFAM7AQ494W8 412 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 CCSMST1Q4G0I0 132 aa3.69□□□□□ -1.82
USP16-205ENST00000474835 VAX1Q5SQQ9 334 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms