RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 DCAF16Q9NXF7 216 aa8.52□□□□□ -1.05
CDHR3-209ENST00000472116 CLN8Q9UBY8 286 aa8.52□□□□□ -1.05
CDHR3-209ENST00000472116 FOXJ3Q9UPW0 622 aa8.52□□□□□ -1.05
CDHR3-209ENST00000472116 SACSQ9NZJ4 4579 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 IGHV1-69DA0A0B4J2H0 117 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 HMX2A2RU54 273 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 ZSCAN5BA6NJL1 495 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 NPIPB8E9PQR5 432 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 H3BQF6 201 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 SLC28A1O00337 649 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 FAAHO00519 579 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 TP73O15350 636 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 FBXO24O75426 580 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 TOX4O94842 621 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 C6orf47O95873 294 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 IGHV1-69P01742 117 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 SDC1P18827 310 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 IMPDH1P20839 514 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 CCNOP22674 350 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 EPHA3P29320 983 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 APLNRP35414 380 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 MSX2P35548 267 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-209ENST00000472116 ETV4P43268 484 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 RPL38P63173 70 aaKnown RBP8.51□□□□□ -1.05
CDHR3-209ENST00000472116 BNIP2Q12982 314 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 CHI3L2Q15782 390 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 COX20Q5RI15 118 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 ZBTB37Q5TC79 503 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 TYW3Q6IPR3 259 aaKnown RBP8.51□□□□□ -1.05
CDHR3-209ENST00000472116 SLC27A4Q6P1M0 643 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 DPPA2Q7Z7J5 298 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 ZNF584Q8IVC4 421 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 SLC22A9Q8IVM8 553 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 MIER2Q8N344 545 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 CADM2Q8N3J6 435 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 PAQR4Q8N4S7 273 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-209ENST00000472116 FITM2Q8N6M3 262 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 DTX3Q8N9I9 347 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 OR4C13Q8NGP0 309 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 MFSD8Q8NHS3 518 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 VANGL1Q8TAA9 524 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-209ENST00000472116 PNPT1Q8TCS8 783 aaKnown RBP8.51□□□□□ -1.05
CDHR3-209ENST00000472116 CNOT9Q92600 299 aaKnown RBP8.51□□□□□ -1.05
CDHR3-209ENST00000472116 LRR1Q96L50 414 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 C3orf30Q96M34 536 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 MECRQ9BV79 373 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 DPY30Q9C005 99 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 ZNF224Q9NZL3 707 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 NOP53Q9NZM5 478 aaKnown RBP8.51□□□□□ -1.05
CDHR3-209ENST00000472116 EIF3KQ9UBQ5 218 aaKnown RBP8.51□□□□□ -1.05
CDHR3-209ENST00000472116 TBK1Q9UHD2 729 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 BAIAP2L1Q9UHR4 511 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 ATP6V1HQ9UI12 483 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 PPP1R3CQ9UQK1 317 aa8.51□□□□□ -1.05
CDHR3-209ENST00000472116 DNAH3Q8TD57 4116 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 A0A0U1RQK1 487 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 CENPVL3A0A0U1RRI6 287 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 ZNF726A6NNF4 738 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 AIM2O14862 343 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 SURF4O15260 269 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 MFN2O95140 757 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 FBP1P09467 338 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 PATE4P0C8F1 98 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 VSIG10L2P0DP72 767 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 THRBP10828 461 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 PTMSP20962 102 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 PRPH2P23942 346 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 MAPK1P28482 360 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 PITPNBP48739 271 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 FOXA1P55317 472 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 SLC35A2P78381 396 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 KIAA0040Q15053 153 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 SLC36A2Q495M3 483 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 GPAT3Q53EU6 434 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 PHYHD1Q5SRE7 291 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 METTL11BQ5VVY1 283 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 ZNF774Q6NX45 483 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 RNF144BQ7Z419 303 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 ZER1Q7Z7L7 766 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 HMGN2P46Q86SG4 172 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 NDUFA11Q86Y39 141 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 UEVLDQ8IX04 471 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 SKA3Q8IX90 412 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 C20orf196Q8IYI0 205 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 ZNF440Q8IYI8 595 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 TMEM123Q8N131 208 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 PSMA8Q8TAA3 256 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 XAGE5Q8WWM1 108 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 CLPTM1LQ96KA5 538 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 SAMD8Q96LT4 415 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 ARHGDIGQ99819 225 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 PPA2Q9H2U2 334 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 TCF7L2Q9NQB0 619 aa8.5□□□□□ -1.05
CDHR3-209ENST00000472116 GAR1Q9NY12 217 aaKnown RBP8.5□□□□□ -1.05
CDHR3-209ENST00000472116 CLDN24A6NM45 220 aa8.49□□□□□ -1.05
CDHR3-209ENST00000472116 TMEM114B3SHH9 223 aa8.49□□□□□ -1.05
CDHR3-209ENST00000472116 ZNF879B4DU55 563 aa8.49□□□□□ -1.05
CDHR3-209ENST00000472116 IFNL4K9M1U5 179 aa8.49□□□□□ -1.05
CDHR3-209ENST00000472116 TIMM8AO60220 97 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms