RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 SNRPD2P62316 118 aaKnown RBP12.17□□□□□ -0.46
COMMD3-208ENST00000470045 RUNX1T1Q06455 604 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 TRAM2Q15035 370 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 HDDC2Q7Z4H3 204 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 TSEN54Q7Z6J9 526 aaKnown RBP12.17□□□□□ -0.46
COMMD3-208ENST00000470045 SLC22A24Q8N4F4 322 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 MOSPD2Q8NHP6 518 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 HTRA1Q92743 480 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 NMD3Q96D46 503 aaKnown RBP12.17□□□□□ -0.46
COMMD3-208ENST00000470045 BPIFA2Q96DR5 249 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 KCTD14Q9BQ13 255 aaPredicted RBP12.17□□□□□ -0.46
COMMD3-208ENST00000470045 FAM107BQ9H098 131 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 SPAG4Q9NPE6 437 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 FBXL3Q9UKT7 428 aa12.17□□□□□ -0.46
COMMD3-208ENST00000470045 ABCA1O95477 2261 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 ENTPD5O75356 428 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 TRMUO75648 421 aaKnown RBP12.16□□□□□ -0.46
COMMD3-208ENST00000470045 IGHMP01871 453 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 QDPRP09417 244 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 OR8G3PP0DMU2 310 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 CD79AP11912 226 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 IFI30P13284 250 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 ZNF35P13682 527 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 ACADSP16219 412 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 NCK1P16333 377 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 THBS4P35443 961 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 YAP1P46937 504 aaKnown RBP12.16□□□□□ -0.46
COMMD3-208ENST00000470045 PPOXP50336 477 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 RAB1AP62820 205 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 PRKCDQ05655 676 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 PIGFQ07326 219 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 FHL1Q13642 323 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 FXNQ16595 210 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 C10orf128Q5T292 105 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 CLEC2AQ6UVW9 174 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 CPLX4Q7Z7G2 160 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 ZNF584Q8IVC4 421 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 SKA3Q8IX90 412 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 ZNF525Q8N782 197 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 LRRC75AQ8NAA5 344 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 MAPK1IP1LQ8NDC0 245 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 FGFBP3Q8TAT2 258 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 ACOT11Q8WXI4 607 aaPredicted RBP12.16□□□□□ -0.46
COMMD3-208ENST00000470045 MCHR2Q969V1 340 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 SORCS2Q96PQ0 1159 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 ZNF347Q96SE7 839 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 RHNO1Q9BSD3 238 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 FNDC11Q9BVV2 318 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 TXNIPQ9H3M7 391 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 ANKRD19PQ9H560 264 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 SMURF2Q9HAU4 748 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 STX18Q9P2W9 335 aaKnown RBP12.16□□□□□ -0.46
COMMD3-208ENST00000470045 RHCGQ9UBD6 479 aa12.16□□□□□ -0.46
COMMD3-208ENST00000470045 FBXO9Q9UK97 447 aaPredicted RBP12.16□□□□□ -0.46
COMMD3-208ENST00000470045 A0A087WUU8 490 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 MCIDASD6RGH6 385 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 RAB36O95755 333 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 F12P00748 615 aaPredicted RBP12.15□□□□□ -0.46
COMMD3-208ENST00000470045 CSF3P09919 207 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 NPR2P20594 1047 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 MAKP20794 623 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 NR4A1P22736 598 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 GIPRP48546 466 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 PTDSS1P48651 473 aaKnown RBP12.15□□□□□ -0.46
COMMD3-208ENST00000470045 GYS2P54840 703 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 CLRN1P58418 232 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 GNGT1P63211 74 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 SNTB2Q13425 540 aaKnown RBP12.15□□□□□ -0.46
COMMD3-208ENST00000470045 DAG1Q14118 895 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 LAPTM4AQ15012 233 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 TAF11Q15544 211 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 ANKDD1AQ495B1 522 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 ALG10Q5BKT4 473 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 VHLLQ6RSH7 139 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 FKBP9P1Q75LS8 142 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 PIGWQ7Z7B1 504 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 DPPA2Q7Z7J5 298 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 NRMQ8IXM6 262 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 RNF113BQ8IZP6 322 aaKnown RBP12.15□□□□□ -0.46
COMMD3-208ENST00000470045 FAM156AQ8NDB6 213 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 RBM15BQ8NDT2 890 aaKnown RBP12.15□□□□□ -0.46
COMMD3-208ENST00000470045 C10orf105Q8TEF2 133 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 HDAC2Q92769 488 aaKnown RBP12.15□□□□□ -0.46
COMMD3-208ENST00000470045 FAM162AQ96A26 154 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 RPS6KA6Q9UK32 745 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 ENPP4Q9Y6X5 453 aa12.15□□□□□ -0.46
COMMD3-208ENST00000470045 TMEM129A0AVI4 362 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 MGRN1O60291 552 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 LY6HO94772 140 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 SERPINA5P05154 406 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 IGFBP1P08833 259 aaPredicted RBP12.14□□□□□ -0.47
COMMD3-208ENST00000470045 SLC25A16P16260 332 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 SLC9A3P48764 834 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 MYBPC1Q00872 1141 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 LOXL1Q08397 574 aaPredicted RBP12.14□□□□□ -0.47
COMMD3-208ENST00000470045 MSMPQ1L6U9 139 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 KRT80Q6KB66 452 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 MBOAT2Q6ZWT7 520 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 SYT14Q8NB59 555 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 OR4K5Q8NGD3 323 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms