RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MMP24Q9Y5R2 645 aa16.05■□□□□ 0.16
NCKIPSD-209ENST00000470006 A0A1B0GUS0 222 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 TRAPPC2LH3BP13 241 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 TIMM23O14925 209 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 ZNF500O60304 480 aaPredicted RBP16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 PTHP01270 115 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 IGHV1-46P01743 117 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 IGHMP01871 453 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 CCNOP22674 350 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 DSTNP60981 165 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 PLP2Q04941 152 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 OR52E2Q8NGJ4 325 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 OR1J1Q8NGS3 322 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 TCP10LQ8TDR4 215 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 WFDC12Q8WWY7 111 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 RHOXF2Q9BQY4 288 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 C1orf198Q9H425 327 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 MKS1Q9NXB0 559 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 SELENONQ9NZV5 590 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 KLHL14Q9P2G3 628 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 EGFL7Q9UHF1 273 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 INSIG2Q9Y5U4 225 aa16.04■□□□□ 0.16
NCKIPSD-209ENST00000470006 NBEAL2Q6ZNJ1 2754 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 A0A0G2JPF8 293 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 IQCMA0A1B0GVH7 501 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 HNRNPCL2B2RXH8 293 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 HNRNPCL3B7ZW38 293 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 RFXANKO14593 260 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 HNRNPCL1O60812 293 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 HNRNPCL4P0DMR1 293 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 LBPP18428 481 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 BIDP55957 195 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 UFM1P61960 85 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 PUDPQ08623 228 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 PDCD4Q53EL6 469 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 ALG10BQ5I7T1 473 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 KLHL36Q8N4N3 616 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 ZNF781Q8N8C0 355 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 OR4F5Q8NH21 305 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 ZDHHC16Q969W1 377 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 TMEM19Q96HH6 336 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 TEX37Q96LM6 180 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 EPYCQ99645 322 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 C12orf10Q9HB07 376 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 NPTNQ9Y639 398 aa16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 SOX21Q9Y651 276 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-209ENST00000470006 A0A1B0GWA3 101 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 C11orf98E9PRG8 122 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 FZD7O75084 574 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 UBOX5O94941 541 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 ANP32DO95626 131 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 IGHV3-13P01766 116 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 MYZAPP0CAP1 466 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 ZNF12P17014 697 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 APLNRP35414 380 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 LRRC74AQ0VAA2 488 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 SLC36A2Q495M3 483 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 ZNF362Q5T0B9 420 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 SPATA46Q5T0L3 261 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 C6orf89Q6UWU4 347 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 SLC16A14Q7RTX9 510 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 PARP8Q8N3A8 854 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 SPICQ8N5J4 248 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 SCAIQ8N9R8 606 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 DNAJA4Q8WW22 397 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 DIRC2Q96SL1 478 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 ZBTB18Q99592 522 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 NPHS2Q9NP85 383 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 GLTPQ9NZD2 209 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 GPR45Q9Y5Y3 372 aa16.02■□□□□ 0.16
NCKIPSD-209ENST00000470006 IGKV1D-42A0A075B6H8 117 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 FAM181BA6NEQ2 426 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 HOXA3O43365 443 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 ITM2AO43736 263 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 OR6A2O95222 327 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 SNAP29O95721 258 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 BPGMP07738 259 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 IGHV4-38-2P0DP08 117 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 RAG2P55895 527 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 ZNF718Q3SXZ3 478 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 OLFML2AQ68BL7 652 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 PXKQ7Z7A4 578 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 NUDCD3Q8IVD9 361 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 RBM15BQ8NDT2 890 aaKnown RBP16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 OR4K5Q8NGD3 323 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 GEMIN6Q8WXD5 167 aaKnown RBP16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 SLC41A3Q96GZ6 507 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 TCF7L2Q9NQB0 619 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 TMEM38BQ9NVV0 291 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 OR5V1Q9UGF6 321 aa16.01■□□□□ 0.15
NCKIPSD-209ENST00000470006 MDFIC2A0A1B0GVS7 189 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 BGLAPP02818 100 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 ADORA3P0DMS8 318 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 NCALDP61601 193 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 SEC61A1P61619 476 aaKnown RBP16■□□□□ 0.15
NCKIPSD-209ENST00000470006 HSF2Q03933 536 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 HNRNPA0Q13151 305 aaKnown RBP16■□□□□ 0.15
NCKIPSD-209ENST00000470006 THEM4Q5T1C6 240 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 WDR88Q6ZMY6 472 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 DPPA2Q7Z7J5 298 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms