RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 OR5K1Q8NHB7 308 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 MAGEE2Q8TD90 523 aaPredicted RBP10.48□□□□□ -0.73
VPS13D-204ENST00000469054 BCL2L2Q92843 193 aaPredicted RBP10.48□□□□□ -0.73
VPS13D-204ENST00000469054 NMD3Q96D46 503 aaKnown RBP10.48□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF570Q96NI8 536 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 RBP7Q96R05 134 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 EGLN3Q9H6Z9 239 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 SLC17A5Q9NRA2 495 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 POFUT2Q9Y2G5 429 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 IER3IP1Q9Y5U9 82 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 MAGED1Q9Y5V3 778 aaPredicted RBP10.48□□□□□ -0.73
VPS13D-204ENST00000469054 SLC25A15Q9Y619 301 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 PTPN13Q12923 2485 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 A0A096LPE4 126 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 TEX13CA0A0J9YWL9 993 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 A0A1W2PPZ6 126 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 FAM221AA4D161 298 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 DEFB108AA8MXU0 73 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 H3BNX3 289 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 IMPA2O14732 288 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ARPC3O15145 178 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ARHGEF9O43307 516 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 DHHO43323 396 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 AHCYL1O43865 530 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ENTPD5O75356 428 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 GOSR1O95249 250 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 PPP1R3DO95685 299 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 TXNDC12O95881 172 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 PRF1P14222 555 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 SSTR2P30874 369 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF133P52736 654 aaPredicted RBP10.47□□□□□ -0.73
VPS13D-204ENST00000469054 MYBPC1Q00872 1141 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 TLE4Q04727 773 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 CD47Q08722 323 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 KRR1Q13601 381 aaKnown RBP10.47□□□□□ -0.73
VPS13D-204ENST00000469054 HIKESHIQ53FT3 197 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 MESTQ5EB52 335 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 CLEC12AQ5QGZ9 265 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 THEM4Q5T1C6 240 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ALKBH2Q6NS38 261 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF627Q7L945 461 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 HIPK1Q86Z02 1210 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ZDHHC13Q8IUH4 622 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 OR52L1Q8NGH7 329 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 FNDC8Q8TC99 324 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 CENPNQ96H22 339 aaPredicted RBP10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ERMAPQ96PL5 475 aaPredicted RBP10.47□□□□□ -0.73
VPS13D-204ENST00000469054 FOXB1Q99853 325 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 IFT27Q9BW83 186 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 PLA2G12AQ9BZM1 189 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 NELFAQ9H3P2 528 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF556Q9HAH1 456 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 SMURF2Q9HAU4 748 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 NGBQ9NPG2 151 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 OBP2BQ9NPH6 170 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 AMDHD2Q9Y303 409 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 ADGRG4Q8IZF6 3080 aa10.47□□□□□ -0.73
VPS13D-204ENST00000469054 PKDREJQ9NTG1 2253 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 IGKV1D-43A0A0B4J1Z2 117 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 A0A1W2PR80 420 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 PRSS37A4D1T9 235 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 G3V2T6 193 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 SOCS2O14508 198 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 SIAH2O43255 324 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 IDH3BO43837 385 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 CTAG2O75638 210 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 HRGP04196 525 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 TP53P04637 393 aaPredicted RBP10.46□□□□□ -0.73
VPS13D-204ENST00000469054 IGFBP1P08833 259 aaPredicted RBP10.46□□□□□ -0.73
VPS13D-204ENST00000469054 UBE2NP61088 152 aaKnown RBP10.46□□□□□ -0.73
VPS13D-204ENST00000469054 BEX5Q5H9J7 111 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 C10orf128Q5T292 105 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 SLC25A47Q6Q0C1 308 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 KLHL17Q6TDP4 642 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 KLHL24Q6TFL4 600 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 SEZ6L2Q6UXD5 910 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF813Q6ZN06 617 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 ADCK1Q86TW2 530 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 CCDC36Q8IYA8 594 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 SVOPLQ8N434 492 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 ATG16L2Q8NAA4 619 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 OR8D4Q8NGM9 314 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 RASD2Q96D21 266 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 TSSK6Q9BXA6 273 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 SEMA6AQ9H2E6 1030 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 S100A14Q9HCY8 104 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 RASSF1Q9NS23 344 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 REV1Q9UBZ9 1251 aa10.46□□□□□ -0.73
VPS13D-204ENST00000469054 NBPF19A0A087WUL8 3843 aa10.46□□□□□ -0.74
VPS13D-204ENST00000469054 ARPC4-TTLL3A0A0A6YYG9 625 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.45□□□□□ -0.74
VPS13D-204ENST00000469054 SLC22A23A1A5C7 686 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 ERICH4A6NGS2 130 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 ANKRD65E5RJM6 399 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 H7C1C5 153 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 BHLHE40O14503 412 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 SEC14L2O76054 403 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 SOX14O95416 240 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 SLC2A10O95528 541 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 WNT11O96014 354 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms