RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 ZNF674Q2M3X9 581 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 TMEM44Q2T9K0 475 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 ALKBH6Q3KRA9 238 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 ODF2Q5BJF6 829 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 SGO1Q5FBB7 561 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 SIRPB2Q5JXA9 342 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 FAM182AQ5T1J6 154 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 C9orf135Q5VTT2 229 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 CST9LP1Q5W188 147 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 RAB12Q6IQ22 244 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 HAPLN4Q86UW8 402 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 MISPQ8IVT2 679 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 GJC3Q8NFK1 279 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 OR2M3Q8NG83 312 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 OR5M8Q8NGP6 311 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 OR9A1PQ8NGU1 263 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 HUS1BQ8NHY5 278 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 SLC7A13Q8TCU3 470 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 PPWD1Q96BP3 646 aaKnown RBP3.85□□□□□ -1.79
HMGB1-207ENST00000468384 SMIM10Q96HG1 83 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 TSGA13Q96PP4 275 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 RAB3IPQ96QF0 476 aaPredicted RBP3.85□□□□□ -1.79
HMGB1-207ENST00000468384 PANX2Q96RD6 677 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 ANP32EQ9BTT0 268 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 SNRNP25Q9BV90 132 aaKnown RBP3.85□□□□□ -1.79
HMGB1-207ENST00000468384 CDCA4Q9BXL8 241 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 P2RY12Q9H244 342 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 NANOGQ9H9S0 305 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 CRNNQ9UBG3 495 aaPredicted RBP3.85□□□□□ -1.79
HMGB1-207ENST00000468384 OSGIN1Q9UJX0 560 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 ZNF346Q9UL40 294 aaKnown RBP3.85□□□□□ -1.79
HMGB1-207ENST00000468384 CEPT1Q9Y6K0 416 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 A3GALT2U3KPV4 340 aa3.85□□□□□ -1.79
HMGB1-207ENST00000468384 TRBV5-7A0A0A0MS05 114 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 TRAV34A0A0B4J273 112 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 HTR3EA5X5Y0 456 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 H0YAE9 185 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 MGST3O14880 152 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 EEDO75530 441 aaKnown RBP3.84□□□□□ -1.79
HMGB1-207ENST00000468384 PCNAP12004 261 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 ETFAP13804 333 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 SPNP16150 400 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 CCNCP24863 283 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 GTF2E2P29084 291 aaKnown RBP3.84□□□□□ -1.79
HMGB1-207ENST00000468384 TACR3P29371 465 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 SERPINB6P35237 376 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 VDAC2P45880 294 aaPredicted RBP3.84□□□□□ -1.79
HMGB1-207ENST00000468384 ASMTP46597 345 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 ALDH3A2P51648 485 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 BTN3A2P78410 334 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 FOXI1Q12951 378 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 SLMAPQ14BN4 828 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 PLPPR5Q32ZL2 321 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 GLYR1Q49A26 553 aaPredicted RBP3.84□□□□□ -1.79
HMGB1-207ENST00000468384 TMEM155Q4W5P6 130 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 C6orf141Q5SZD1 244 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 PDSS1Q5T2R2 415 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 LGSNQ5TDP6 509 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 ZNF774Q6NX45 483 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 PET117Q6UWS5 81 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 TAS2R42Q7RTR8 314 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 SGPP2Q8IWX5 399 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 SLC43A2Q8N370 569 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 DPP10Q8N608 796 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 TMCO5AQ8N6Q1 288 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 SPC24Q8NBT2 197 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 OR4X2Q8NGF9 303 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 CLHC1Q8NHS4 586 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 SPATA22Q8NHS9 363 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 NT5CQ8TCD5 201 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 SKA2Q8WVK7 121 aaPredicted RBP3.84□□□□□ -1.79
HMGB1-207ENST00000468384 LPGAT1Q92604 370 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 ADIPOR1Q96A54 375 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 RRNAD1Q96FB5 475 aaKnown RBP3.84□□□□□ -1.79
HMGB1-207ENST00000468384 DUS3LQ96G46 650 aaKnown RBP3.84□□□□□ -1.79
HMGB1-207ENST00000468384 DUX3Q96PT4 197 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 CDRT15Q96T59 188 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 ATF6BQ99941 703 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 SRXN1Q9BYN0 137 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 KLHL31Q9H511 634 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 CNOT10Q9H9A5 744 aaKnown RBP3.84□□□□□ -1.79
HMGB1-207ENST00000468384 NANSQ9NR45 359 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 KLHL9Q9P2J3 617 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 MALT1Q9UDY8 824 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 FZR1Q9UM11 496 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 NPTNQ9Y639 398 aa3.84□□□□□ -1.79
HMGB1-207ENST00000468384 IGHV2OR16-5A0A0B4J2B6 119 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 LOC285095A0A1B0GVY8 99 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 A0A1W2PPW3 197 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 ZNF320A2RRD8 509 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 ZNF879B4DU55 563 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 PDLIM1O00151 329 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 LGALS9O00182 355 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 FBP2O00757 339 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 OGG1O15527 345 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 IGLV1-44P01699 117 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 SNRNP70P08621 437 aaKnown RBP3.83□□□□□ -1.8
HMGB1-207ENST00000468384 WNT2P09544 360 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 OR56A5P0C7T3 313 aa3.83□□□□□ -1.8
HMGB1-207ENST00000468384 MAKP20794 623 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms