RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ZNF75AQ96N20 296 aa7.82□□□□□ -1.16
APP-213ENST00000464867 OR7D2Q96RA2 312 aa7.82□□□□□ -1.16
APP-213ENST00000464867 TBX15Q96SF7 602 aa7.82□□□□□ -1.16
APP-213ENST00000464867 PRPF18Q99633 342 aaKnown RBP7.82□□□□□ -1.16
APP-213ENST00000464867 PCGF1Q9BSM1 259 aa7.82□□□□□ -1.16
APP-213ENST00000464867 SLC19A3Q9BZV2 496 aa7.82□□□□□ -1.16
APP-213ENST00000464867 TRIM31Q9BZY9 425 aa7.82□□□□□ -1.16
APP-213ENST00000464867 PALMDQ9NP74 551 aa7.82□□□□□ -1.16
APP-213ENST00000464867 RRAGDQ9NQL2 400 aaPredicted RBP7.82□□□□□ -1.16
APP-213ENST00000464867 EXOSC3Q9NQT5 275 aaKnown RBP7.82□□□□□ -1.16
APP-213ENST00000464867 TMEM106BQ9NUM4 274 aa7.82□□□□□ -1.16
APP-213ENST00000464867 FBLN5Q9UBX5 448 aa7.82□□□□□ -1.16
APP-213ENST00000464867 ZDHHC8Q9ULC8 765 aa7.82□□□□□ -1.16
APP-213ENST00000464867 TIMM22Q9Y584 194 aa7.82□□□□□ -1.16
APP-213ENST00000464867 USH1CQ9Y6N9 552 aa7.82□□□□□ -1.16
APP-213ENST00000464867 DNAH3Q8TD57 4116 aa7.81□□□□□ -1.16
APP-213ENST00000464867 F5H0A9 414 aaPredicted RBP7.81□□□□□ -1.16
APP-213ENST00000464867 TM9SF1O15321 606 aa7.81□□□□□ -1.16
APP-213ENST00000464867 FCMRO60667 390 aa7.81□□□□□ -1.16
APP-213ENST00000464867 TBX19O60806 448 aa7.81□□□□□ -1.16
APP-213ENST00000464867 ENTPD5O75356 428 aa7.81□□□□□ -1.16
APP-213ENST00000464867 IGHV3-13P01766 116 aa7.81□□□□□ -1.16
APP-213ENST00000464867 RPS2P15880 293 aaKnown RBP7.81□□□□□ -1.16
APP-213ENST00000464867 EFNA1P20827 205 aaPredicted RBP7.81□□□□□ -1.16
APP-213ENST00000464867 MDH2P40926 338 aaKnown RBP7.81□□□□□ -1.16
APP-213ENST00000464867 PKNOX1P55347 436 aa7.81□□□□□ -1.16
APP-213ENST00000464867 UCP2P55851 309 aa7.81□□□□□ -1.16
APP-213ENST00000464867 FGF12P61328 243 aa7.81□□□□□ -1.16
APP-213ENST00000464867 DR1Q01658 176 aa7.81□□□□□ -1.16
APP-213ENST00000464867 PMS2P3Q13401 168 aa7.81□□□□□ -1.16
APP-213ENST00000464867 CLEC6AQ6EIG7 209 aa7.81□□□□□ -1.16
APP-213ENST00000464867 SLC35E4Q6ICL7 350 aa7.81□□□□□ -1.16
APP-213ENST00000464867 SCCPDHQ8NBX0 429 aa7.81□□□□□ -1.16
APP-213ENST00000464867 FAM71CQ8NEG0 241 aa7.81□□□□□ -1.16
APP-213ENST00000464867 SLC30A7Q8NEW0 376 aa7.81□□□□□ -1.16
APP-213ENST00000464867 VPS37AQ8NEZ2 397 aa7.81□□□□□ -1.16
APP-213ENST00000464867 OR1J2Q8NGS2 313 aa7.81□□□□□ -1.16
APP-213ENST00000464867 MUC7Q8TAX7 377 aa7.81□□□□□ -1.16
APP-213ENST00000464867 CFHR4Q92496 578 aa7.81□□□□□ -1.16
APP-213ENST00000464867 MRPL57Q9BQC6 102 aaKnown RBP7.81□□□□□ -1.16
APP-213ENST00000464867 NUDT16L1Q9BRJ7 211 aaKnown RBP7.81□□□□□ -1.16
APP-213ENST00000464867 MRPL46Q9H2W6 279 aaKnown RBP7.81□□□□□ -1.16
APP-213ENST00000464867 C1orf198Q9H425 327 aa7.81□□□□□ -1.16
APP-213ENST00000464867 RNF121Q9H920 327 aa7.81□□□□□ -1.16
APP-213ENST00000464867 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.81□□□□□ -1.16
APP-213ENST00000464867 EXD2Q9NVH0 621 aa7.81□□□□□ -1.16
APP-213ENST00000464867 KCNE5Q9UJ90 142 aa7.81□□□□□ -1.16
APP-213ENST00000464867 FAM96BQ9Y3D0 163 aa7.81□□□□□ -1.16
APP-213ENST00000464867 WI2-2373I1.2A0A1W2PRP0 233 aa7.8□□□□□ -1.16
APP-213ENST00000464867 A8MT66 165 aa7.8□□□□□ -1.16
APP-213ENST00000464867 A8MVM7 634 aa7.8□□□□□ -1.16
APP-213ENST00000464867 P2RY10O00398 339 aa7.8□□□□□ -1.16
APP-213ENST00000464867 EIF3HO15372 352 aaKnown RBP eCLIP7.8□□□□□ -1.16
APP-213ENST00000464867 MGRN1O60291 552 aa7.8□□□□□ -1.16
APP-213ENST00000464867 CRCPO75575 148 aa7.8□□□□□ -1.16
APP-213ENST00000464867 PTHP01270 115 aa7.8□□□□□ -1.16
APP-213ENST00000464867 WNT2P09544 360 aa7.8□□□□□ -1.16
APP-213ENST00000464867 B4GALT1P15291 398 aa7.8□□□□□ -1.16
APP-213ENST00000464867 IGLL1P15814 213 aa7.8□□□□□ -1.16
APP-213ENST00000464867 TNFRSF1AP19438 455 aa7.8□□□□□ -1.16
APP-213ENST00000464867 TAC1P20366 129 aa7.8□□□□□ -1.16
APP-213ENST00000464867 ZNF75DP51815 510 aa7.8□□□□□ -1.16
APP-213ENST00000464867 LINC00310P59036 64 aa7.8□□□□□ -1.16
APP-213ENST00000464867 TNFAIP6P98066 277 aaPredicted RBP7.8□□□□□ -1.16
APP-213ENST00000464867 PAX2Q02962 417 aa7.8□□□□□ -1.16
APP-213ENST00000464867 ZMYND11Q15326 602 aa7.8□□□□□ -1.16
APP-213ENST00000464867 UAP1Q16222 522 aaPredicted RBP7.8□□□□□ -1.16
APP-213ENST00000464867 TBC1D28Q2M2D7 210 aa7.8□□□□□ -1.16
APP-213ENST00000464867 LSM12Q3MHD2 195 aaKnown RBP7.8□□□□□ -1.16
APP-213ENST00000464867 ZNF718Q3SXZ3 478 aa7.8□□□□□ -1.16
APP-213ENST00000464867 ZNF385BQ569K4 471 aa7.8□□□□□ -1.16
APP-213ENST00000464867 TEX35Q5T0J7 233 aa7.8□□□□□ -1.16
APP-213ENST00000464867 UNQ6126/PRO20091Q6UXV3 157 aa7.8□□□□□ -1.16
APP-213ENST00000464867 NLRC3Q7RTR2 1065 aa7.8□□□□□ -1.16
APP-213ENST00000464867 PIWIL3Q7Z3Z3 882 aaKnown RBP7.8□□□□□ -1.16
APP-213ENST00000464867 PTOV1Q86YD1 416 aa7.8□□□□□ -1.16
APP-213ENST00000464867 LDLRAD3Q86YD5 345 aa7.8□□□□□ -1.16
APP-213ENST00000464867 KDM8Q8N371 416 aa7.8□□□□□ -1.16
APP-213ENST00000464867 OR5D16Q8NGK9 328 aa7.8□□□□□ -1.16
APP-213ENST00000464867 GEMIN6Q8WXD5 167 aaKnown RBP7.8□□□□□ -1.16
APP-213ENST00000464867 ZG16BQ96DA0 208 aa7.8□□□□□ -1.16
APP-213ENST00000464867 METTL2AQ96IZ6 378 aaKnown RBP7.8□□□□□ -1.16
APP-213ENST00000464867 A4GALTQ9NPC4 353 aa7.8□□□□□ -1.16
APP-213ENST00000464867 CGGBP1Q9UFW8 167 aaPredicted RBP7.8□□□□□ -1.16
APP-213ENST00000464867 MIOXQ9UGB7 285 aa7.8□□□□□ -1.16
APP-213ENST00000464867 VPREB3Q9UKI3 123 aa7.8□□□□□ -1.16
APP-213ENST00000464867 CENPVL1A0A0U1RR11 272 aa7.79□□□□□ -1.16
APP-213ENST00000464867 TMEM82A0PJX8 343 aa7.79□□□□□ -1.16
APP-213ENST00000464867 CEACAM18A8MTB9 384 aa7.79□□□□□ -1.16
APP-213ENST00000464867 RNASEK-C17orf49H0YIS7 233 aa7.79□□□□□ -1.16
APP-213ENST00000464867 TFPTP0C1Z6 253 aa7.79□□□□□ -1.16
APP-213ENST00000464867 MATN1P21941 496 aa7.79□□□□□ -1.16
APP-213ENST00000464867 TNFSF4P23510 183 aa7.79□□□□□ -1.16
APP-213ENST00000464867 MSX2P35548 267 aaPredicted RBP7.79□□□□□ -1.16
APP-213ENST00000464867 P2RY4P51582 365 aa7.79□□□□□ -1.16
APP-213ENST00000464867 AQP5P55064 265 aa7.79□□□□□ -1.16
APP-213ENST00000464867 ERVS71-1P61550 626 aa7.79□□□□□ -1.16
APP-213ENST00000464867 KCNJ10P78508 379 aa7.79□□□□□ -1.16
APP-213ENST00000464867 MFSD13AQ14CX5 517 aa7.79□□□□□ -1.16
APP-213ENST00000464867 GSTA3Q16772 222 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms