RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 VPS39Q96JC1 886 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 SERPINB12Q96P63 405 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 KRT12Q99456 494 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 METTL7AQ9H8H3 244 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 B3GAT1Q9P2W7 334 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 ASIC3Q9UHC3 531 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 ZNF639Q9UID6 485 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 ZDHHC2Q9UIJ5 367 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 TCF19Q9Y242 345 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 ASB4Q9Y574 426 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 MAD1L1Q9Y6D9 718 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 COL7A1Q02388 2944 aa4.1□□□□□ -1.75
COPS3-204ENST00000462236 A0A0A6YYD5 115 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 MAGEB16A2A368 324 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 SDR42E2A6NKP2 422 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 MIF4GDA9UHW6 222 aaKnown RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 TRIM77I1YAP6 450 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 ACOX3O15254 700 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 TAPBPO15533 448 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 TSPAN2O60636 221 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 RAMP1O60894 148 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 PRKRAO75569 313 aaKnown RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 WISP3O95389 354 aaPredicted RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 CSF3P09919 207 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 SAGP10523 405 aaPredicted RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 ACP2P11117 423 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 MLNP12872 115 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 HNF1AP20823 631 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 DPP4P27487 766 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 EPHA2P29317 976 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 SLC6A8P48029 635 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 HNMTP50135 292 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 BSPH1Q075Z2 132 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 TGM3Q08188 693 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 PON3Q15166 354 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 TAF13Q15543 124 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 TAB1Q15750 504 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 ZSWIM7Q19AV6 140 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 CTU2Q2VPK5 515 aaKnown RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 KBTBD12Q3ZCT8 623 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 SYT14P1Q58G82 188 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 ELFN2Q5R3F8 820 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 ANKRD22Q5VYY1 191 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 MFSD12Q6NUT3 480 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 KRT77Q7Z794 578 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 CCDC170Q8IYT3 715 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 GBP7Q8N8V2 638 aaPredicted RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 OR7G1Q8NGA0 311 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 FGFBP3Q8TAT2 258 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 RDH11Q8TC12 318 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 C1orf54Q8WWF1 131 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 HSD17B8Q92506 261 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 RIT1Q92963 219 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 S100PBPQ96BU1 408 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 OMA1Q96E52 524 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 GMPPAQ96IJ6 420 aaPredicted RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 FEVQ99581 238 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 NAA11Q9BSU3 229 aaPredicted RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 NTMT1Q9BV86 223 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 PINK1Q9BXM7 581 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 CACNG6Q9BXT2 260 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 TSGA10Q9BZW7 698 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 COPS7BQ9H9Q2 264 aaPredicted RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 CBLN4Q9NTU7 201 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 MS4A12Q9NXJ0 267 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 FLRT3Q9NZU0 649 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 PACSIN2Q9UNF0 486 aaPredicted RBP4.09□□□□□ -1.75
COPS3-204ENST00000462236 ZNF337Q9Y3M9 751 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 OARD1Q9Y530 152 aa4.09□□□□□ -1.75
COPS3-204ENST00000462236 TANC2Q9HCD6 1990 aa4.09□□□□□ -1.76
COPS3-204ENST00000462236 DYNC2H1Q8NCM8 4307 aaKnown RBP4.08□□□□□ -1.76
COPS3-204ENST00000462236 IGHV4-61A0A0C4DH41 118 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 OR6C70A6NIJ9 312 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 C17orf51A8MQB3 221 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 E7EQL1 145 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 PLPP1O14494 284 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 CLOCKO15516 846 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 EFNA1P20827 205 aaPredicted RBP4.08□□□□□ -1.76
COPS3-204ENST00000462236 PTAFRP25105 342 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 DEKP35659 375 aaKnown RBP4.08□□□□□ -1.76
COPS3-204ENST00000462236 EMDP50402 254 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 DSCR4P56555 118 aaPredicted RBP4.08□□□□□ -1.76
COPS3-204ENST00000462236 BASP1P80723 227 aaKnown RBP4.08□□□□□ -1.76
COPS3-204ENST00000462236 LGALS3BPQ08380 585 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 SLAMF1Q13291 335 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 DOC2AQ14183 400 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 MORF4L2Q15014 288 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 P2RY6Q15077 328 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 EXOC3L2Q2M3D2 409 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 GLYR1Q49A26 553 aaPredicted RBP4.08□□□□□ -1.76
COPS3-204ENST00000462236 HSP90AA5PQ58FG0 334 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 KRBOX4Q5JUW0 171 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 CDKL4Q5MAI5 379 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 AGAP6Q5VW22 663 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 KHDRBS2Q5VWX1 349 aaKnown RBP4.08□□□□□ -1.76
COPS3-204ENST00000462236 OR4C11Q6IEV9 310 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 TFAP2EQ6VUC0 442 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 USP43Q70EL4 1123 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 UBL4BQ8N7F7 174 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 NPEPL1Q8NDH3 523 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms