RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 SLC22A13Q9Y226 551 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 MRPS2Q9Y399 296 aaKnown RBP13.2□□□□□ -0.3
NCL-207ENST00000461347 HRH3Q9Y5N1 445 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 MYOGP15173 224 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 DRD3P35462 400 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 PPP2CBP62714 309 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 PPP2CAP67775 309 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 SERTAD2Q14140 314 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 DOC2BQ14184 412 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 CLVS2Q5SYC1 327 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 COX15Q7KZN9 410 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 LSMEM1Q8N8F7 131 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 NEK7Q8TDX7 302 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 NPRL2Q8WTW4 380 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 FOXRED1Q96CU9 486 aaPredicted RBP13.2□□□□□ -0.3
NCL-207ENST00000461347 LRRC3BQ96PB8 259 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 POLE3Q9NRF9 147 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 OR5V1Q9UGF6 321 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 MSRAQ9UJ68 235 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 PCNTO95613 3336 aa13.2□□□□□ -0.3
NCL-207ENST00000461347 IGKV1-8A0A0C4DH67 115 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 LINC00862A6NCI5 91 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 SNRPGP15A8MWD9 76 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 D6RAR5 112 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 RRASP10301 218 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 OR1D4P47884 311 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 EEF1A1P68104 462 aaKnown RBP13.19□□□□□ -0.3
NCL-207ENST00000461347 RTL10Q7L3V2 364 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 TMEM234Q8WY98 164 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 SDHAF3Q9NRP4 125 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 C14orf166Q9Y224 244 aaKnown RBP13.19□□□□□ -0.3
NCL-207ENST00000461347 VDAC3Q9Y277 283 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 EMC9Q9Y3B6 208 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 LOC100289279A0A1B0GTE1 492 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 TLX3O43711 291 aaPredicted RBP13.19□□□□□ -0.3
NCL-207ENST00000461347 GALR3O60755 368 aaPredicted RBP13.19□□□□□ -0.3
NCL-207ENST00000461347 KNG1P01042 644 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 ACHEP22303 614 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 ZNF136P52737 540 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 MELKQ14680 651 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 NKAPLQ5M9Q1 402 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 WDR88Q6ZMY6 472 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 PXKQ7Z7A4 578 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 ZAR1Q86SH2 424 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 RFLNBQ8N5W9 214 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 OR14A16Q8NHC5 309 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 TTC9Q92623 222 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 DAZLQ92904 295 aaKnown RBP13.19□□□□□ -0.3
NCL-207ENST00000461347 FAM71F1Q96KD3 344 aaPredicted RBP13.19□□□□□ -0.3
NCL-207ENST00000461347 ZNF681Q96N22 645 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 HRH4Q9H3N8 390 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 ZNF304Q9HCX3 659 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 C2orf42Q9NWW7 574 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 A0A087WV62 115 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 A0A0B4J2A0 478 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 A0A1B0GV50 99 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 HTR3BO95264 441 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 CFDP00746 253 aaPredicted RBP13.19□□□□□ -0.3
NCL-207ENST00000461347 HLA-DQB1P01920 261 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
NCL-207ENST00000461347 ANKRD34CP0C6C1 535 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 ABCA11PQ4W5N1 156 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 SHISA6Q6ZSJ9 500 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 LINC00346Q8IVM7 164 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 FRMD1Q8N878 549 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 OR1J4Q8NGS1 313 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 OR2G2Q8NGZ5 317 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 OR4C3Q8NH37 302 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 SLC37A2Q8TED4 501 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 RSC1A1Q92681 617 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 GPR137Q96N19 417 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 UBL7Q96S82 380 aaPredicted RBP13.19□□□□□ -0.3
NCL-207ENST00000461347 APMAPQ9HDC9 416 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 SHPKQ9UHJ6 478 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 KIF25Q9UIL4 384 aa13.19□□□□□ -0.3
NCL-207ENST00000461347 TMEM235A6NFC5 223 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 MOSPD3O75425 235 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 PMS2P2O95744 297 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 BTG2P78543 158 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 C3orf33Q6P1S2 294 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 TRAPPC6BQ86SZ2 158 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 DND1Q8IYX4 353 aaKnown RBP13.18□□□□□ -0.3
NCL-207ENST00000461347 OR1F2PQ96R84 312 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 EVA1AQ9H8M9 152 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 EDARQ9UNE0 448 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 TRPM7Q96QT4 1865 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 GGT3PA6NGU5 568 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 NDUFB6O95139 128 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 OPN1LWP04000 364 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 MEF2DQ14814 521 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 SLC9A3R2Q15599 337 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 TMEM225Q6GV28 225 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 ZNF704Q6ZNC4 412 aaPredicted RBP13.18□□□□□ -0.3
NCL-207ENST00000461347 SLC43A2Q8N370 569 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 FAM71CQ8NEG0 241 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 OR13C9Q8NGT0 318 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 SLC41A2Q96JW4 573 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 LINC00052Q96N35 136 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 CNTNAP3BQ96NU0 1288 aa13.18□□□□□ -0.3
NCL-207ENST00000461347 NECAB3Q96P71 396 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms