RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CST9LP1Q5W188 147 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 LSMEM2Q8N112 164 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 NANOS1Q8WY41 292 aaKnown RBP9.01□□□□□ -0.97
UFD1-205ENST00000459854 WDR77Q9BQA1 342 aaPredicted RBP9.01□□□□□ -0.97
UFD1-205ENST00000459854 HERPUD2Q9BSE4 406 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 INIPQ9NRY2 104 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 ASH2LQ9UBL3 628 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 CACFD1Q9UGQ2 172 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 RHBDD3Q9Y3P4 386 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 OR6C68A6NDL8 312 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 GABRR3A8MPY1 467 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 A8MUA0 341 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 GPX2P18283 190 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 TNFRSF1BP20333 461 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 EPHA1P21709 976 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 HNRNPKP61978 463 aaKnown RBP eCLIP9.01□□□□□ -0.974e-6■■■□□ 18
UFD1-205ENST00000459854 CLINT1Q14677 625 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 MPPED2Q15777 294 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 ATPAF1Q5TC12 328 aaPredicted RBP9.01□□□□□ -0.97
UFD1-205ENST00000459854 KCTD11Q693B1 232 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 IL17RCQ8NAC3 791 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 TSLPQ969D9 159 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 NKX3-1Q99801 234 aaPredicted RBP9.01□□□□□ -0.97
UFD1-205ENST00000459854 OR51I2Q9H344 312 aa9.01□□□□□ -0.97
UFD1-205ENST00000459854 SIDT1Q9NXL6 827 aaKnown RBP9.01□□□□□ -0.97
UFD1-205ENST00000459854 TRBV23OR9-2A0A075B6M9 112 aa9□□□□□ -0.97
UFD1-205ENST00000459854 E5RGE8 158 aa9□□□□□ -0.97
UFD1-205ENST00000459854 ST8SIA3O43173 380 aa9□□□□□ -0.97
UFD1-205ENST00000459854 NCR1O76036 304 aa9□□□□□ -0.97
UFD1-205ENST00000459854 SHC1P29353 583 aa9□□□□□ -0.97
UFD1-205ENST00000459854 HNRNPA1L2Q32P51 320 aaKnown RBP9□□□□□ -0.97
UFD1-205ENST00000459854 OR2T2Q6IF00 324 aa9□□□□□ -0.97
UFD1-205ENST00000459854 ZNF551Q7Z340 670 aaPredicted RBP9□□□□□ -0.97
UFD1-205ENST00000459854 OR2L13Q8N349 312 aa9□□□□□ -0.97
UFD1-205ENST00000459854 DPH7Q9BTV6 452 aa9□□□□□ -0.97
UFD1-205ENST00000459854 POFUT1Q9H488 388 aa9□□□□□ -0.97
UFD1-205ENST00000459854 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9□□□□□ -0.97
UFD1-205ENST00000459854 ACOXLQ9NUZ1 547 aa9□□□□□ -0.97
UFD1-205ENST00000459854 ZNF443Q9Y2A4 671 aaPredicted RBP9□□□□□ -0.97
UFD1-205ENST00000459854 GLOD5A6NK44 160 aa9□□□□□ -0.97
UFD1-205ENST00000459854 TRAF3IP2O43734 574 aaPredicted RBP9□□□□□ -0.97
UFD1-205ENST00000459854 B4GALT2O60909 372 aa9□□□□□ -0.97
UFD1-205ENST00000459854 ZNF728P0DKX0 622 aa9□□□□□ -0.97
UFD1-205ENST00000459854 HIST1H3AP68431 136 aa9□□□□□ -0.97
UFD1-205ENST00000459854 RPS26P11Q5JNZ5 115 aaPredicted RBP9□□□□□ -0.97
UFD1-205ENST00000459854 KLHDC8AQ8IYD2 350 aa9□□□□□ -0.97
UFD1-205ENST00000459854 OR6K3Q8NGY3 331 aa9□□□□□ -0.97
UFD1-205ENST00000459854 OR2G3Q8NGZ4 309 aa9□□□□□ -0.97
UFD1-205ENST00000459854 CXorf58Q96LI9 332 aa9□□□□□ -0.97
UFD1-205ENST00000459854 MBOAT4Q96T53 435 aa9□□□□□ -0.97
UFD1-205ENST00000459854 CD37P11049 281 aa9□□□□□ -0.97
UFD1-205ENST00000459854 DUSP1P28562 367 aa9□□□□□ -0.97
UFD1-205ENST00000459854 AHRP35869 848 aa9□□□□□ -0.97
UFD1-205ENST00000459854 KCNJ5P48544 419 aa9□□□□□ -0.97
UFD1-205ENST00000459854 ENTPD8Q5MY95 495 aa9□□□□□ -0.97
UFD1-205ENST00000459854 TECPR1Q7Z6L1 1165 aa9□□□□□ -0.97
UFD1-205ENST00000459854 GKN2Q86XP6 184 aa9□□□□□ -0.97
UFD1-205ENST00000459854 SEC22AQ96IW7 307 aa9□□□□□ -0.97
UFD1-205ENST00000459854 CCNL2Q96S94 520 aaPredicted RBP9□□□□□ -0.97
UFD1-205ENST00000459854 IER2Q9BTL4 223 aa9□□□□□ -0.97
UFD1-205ENST00000459854 TMEM59Q9BXS4 323 aa9□□□□□ -0.97
UFD1-205ENST00000459854 SLC2A4RGQ9NR83 387 aa9□□□□□ -0.97
UFD1-205ENST00000459854 SLCO3A1Q9UIG8 710 aa9□□□□□ -0.97
UFD1-205ENST00000459854 LINC00862A6NCI5 91 aa9□□□□□ -0.97
UFD1-205ENST00000459854 CCKARP32238 428 aa9□□□□□ -0.97
UFD1-205ENST00000459854 CD80P33681 288 aa9□□□□□ -0.97
UFD1-205ENST00000459854 RAB28P51157 221 aa9□□□□□ -0.97
UFD1-205ENST00000459854 CAMK2BQ13554 666 aa9□□□□□ -0.97
UFD1-205ENST00000459854 PTPRCAPQ14761 206 aa9□□□□□ -0.97
UFD1-205ENST00000459854 MEP1BQ16820 701 aa9□□□□□ -0.97
UFD1-205ENST00000459854 TMEM183BQ1AE95 376 aa9□□□□□ -0.97
UFD1-205ENST00000459854 IL20RBQ6UXL0 311 aa9□□□□□ -0.97
UFD1-205ENST00000459854 SLC38A6Q8IZM9 456 aa9□□□□□ -0.97
UFD1-205ENST00000459854 SLC46A1Q96NT5 459 aa9□□□□□ -0.97
UFD1-205ENST00000459854 CABLES2Q9BTV7 478 aa9□□□□□ -0.97
UFD1-205ENST00000459854 ARV1Q9H2C2 271 aa9□□□□□ -0.97
UFD1-205ENST00000459854 ZNF160Q9HCG1 818 aa9□□□□□ -0.97
UFD1-205ENST00000459854 OR5H14A6NHG9 310 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 RFPL4AA6NLU0 287 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 RFPL4AL1F8VTS6 287 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 HNRNPA3P51991 378 aaKnown RBP8.99□□□□□ -0.97
UFD1-205ENST00000459854 GRM7Q14831 915 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 EXOSC6Q5RKV6 272 aaKnown RBP8.99□□□□□ -0.97
UFD1-205ENST00000459854 WBP2NLQ6ICG8 309 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 SLC35D2Q76EJ3 337 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 GPR137CQ8N3F9 429 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 SPICQ8N5J4 248 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 TMEM156Q8N614 296 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 TCTEX1D1Q8N7M0 179 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 SDR9C7Q8NEX9 313 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 VAMP8Q9BV40 100 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 C1orf198Q9H425 327 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 CUTCQ9NTM9 273 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 NSG2Q9Y328 171 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 A8MVM7 634 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 GPR171O14626 319 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 THBS1P07996 1170 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 NME1P15531 152 aaKnown RBP8.99□□□□□ -0.97
UFD1-205ENST00000459854 SRMP19623 302 aa8.99□□□□□ -0.97
UFD1-205ENST00000459854 FASLGP48023 281 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms