RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 YIPF6Q96EC8 236 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 NSL1Q96IY1 281 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 CAPNS2Q96L46 248 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 NOL4LQ96MY1 436 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 KCNA7Q96RP8 456 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 PSD2Q9BQI7 771 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAIM2Q9BWQ8 316 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 UBXN6Q9BZV1 441 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 MFSD1Q9H3U5 465 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 GLIPR2Q9H4G4 154 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 XPNPEP1Q9NQW7 623 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SDR39U1Q9NRG7 319 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 PARVAQ9NVD7 372 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 COPS3Q9UNS2 423 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 CPDO75976 1380 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 TAF1P21675 1872 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 A0A087WZ39 114 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 A0A0A6YYD5 115 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 IGHV2-70DA0A0C4DH43 119 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 TRBV4-1A0A0J9YWV2 114 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ZCWPW2A0A1B0GU75 182 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 GJE1A6NN92 205 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 HACD1B0YJ81 288 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 SNURFLB1AK76 121 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ANHXE9PGG2 379 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 SMIM22K7EJ46 135 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 K7ERI5 159 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 DFFAO00273 331 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 KPNA3O00505 521 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 FCN1O00602 326 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 HSD17B6O14756 317 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 CXCL13O43927 109 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 TDP2O95551 362 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 RAB36O95755 333 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 LSM8O95777 96 aaKnown RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 CLIC3O95833 236 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ANGPTL1O95841 491 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 HBE1P02100 147 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ACSM4P0C7M7 580 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 MYOD1P15172 320 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 HIST1H1CP16403 213 aaKnown RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 GM2AP17900 193 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 PVALBP20472 110 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 EDNRAP25101 427 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 SERPINB1P30740 379 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 IDH3GP51553 393 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR1D5P58170 312 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR4D2P58180 307 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 TAS2R60P59551 318 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ZP1P60852 638 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ILF3Q12906 894 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ASAH1Q13510 395 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ZNF234Q14588 700 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 LAGE3Q14657 143 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 SMCO1Q147U7 214 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 PON3Q15166 354 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 DGUOKQ16854 277 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 CHRFAM7AQ494W8 412 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 RFTN2Q52LD8 501 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 VWA2Q5GFL6 755 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAM45BPQ6NSW5 357 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 NIPAL1Q6NVV3 410 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 PARM1Q6UWI2 310 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 Q6YL49 198 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 CCNI2Q6ZMN8 369 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 C16orf82Q7Z2V1 217 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 PIWIL4Q7Z3Z4 852 aaKnown RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 RNF113BQ8IZP6 322 aaKnown RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 STPG2Q8N412 459 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 EID2Q8N6I1 236 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 LRRC52Q8N7C0 313 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 SLC37A3Q8NCC5 494 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR10Z1Q8NGY1 313 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR51A7Q8NH64 312 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ACTRT1Q8TDG2 376 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 RASSF5Q8WWW0 418 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 UFD1Q92890 307 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 TOMM40LQ969M1 308 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 CREB3L1Q96BA8 519 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 RTP4Q96DX8 246 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 FBXO17Q96EF6 278 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 RITA1Q96K30 269 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 CEP170P1Q96L14 293 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 CSF3RQ99062 836 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 TEAD3Q99594 435 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 SLC35A5Q9BS91 424 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 CABLES2Q9BTV7 478 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 NUDT9Q9BW91 350 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 ASB7Q9H672 318 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 REEP4Q9H6H4 257 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 MAP6D1Q9H9H5 199 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 APOBEC3GQ9HC16 384 aaKnown RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 TMEM45AQ9NWC5 275 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 TEX10Q9NXF1 929 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 DKK2Q9UBU2 259 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 GINS2Q9Y248 185 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 RAI2Q9Y5P3 530 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 USH1CQ9Y6N9 552 aa3.8□□□□□ -1.8
HMGB3P21-201ENST00000452483 SPATA31D1Q6ZQQ2 1576 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms