RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CFHR2P36980 270 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 RGRP47804 291 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 TFPI2P48307 235 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 TAF6P49848 677 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 GPM6AP51674 278 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 PLK1P53350 603 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 RPL32P62910 135 aaKnown RBP3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 MS4A2Q01362 244 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 GPR176Q14439 515 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 ARL6IP1Q15041 203 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 NSUN5P1Q3KNT7 163 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 C6orf183Q5T699 404 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 GPR107Q5VW38 600 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 ERICH5Q6P6B1 374 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 TRIM40Q6P9F5 258 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 ASCL4Q6XD76 172 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 ACOT7LQ6ZUV0 252 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 GDPD3Q7L5L3 318 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 DEFB132Q7Z7B7 95 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 PLA2G4DQ86XP0 818 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 ST13P4Q8IZP2 240 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 FTMTQ8N4E7 242 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 EID2Q8N6I1 236 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 FNDC5Q8NAU1 212 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 SLC7A13Q8TCU3 470 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 C9orf72Q96LT7 481 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 ECSITQ9BQ95 431 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 SOSTQ9BQB4 213 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 PYGO2Q9BRQ0 406 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 UBXN6Q9BZV1 441 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 ELOVL4Q9GZR5 314 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 ZBP1Q9H171 429 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 NTN4Q9HB63 628 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 FOLH1BQ9HBA9 442 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 ZC4H2Q9NQZ6 224 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 SAMSN1Q9NSI8 373 aaKnown RBP3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 SENP1Q9P0U3 644 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 UTRNP46939 3433 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 SH3TC1Q8TE82 1336 aa3.44□□□□□ -1.86
HMGB1P48-201ENST00000446155 TP53BP1Q12888 1972 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 TRAV6A0A075B6T7 132 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 PRSS37A4D1T9 235 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 GJB5O95377 273 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 YEATS4O95619 227 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 IGHV2-5P01817 119 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 DCNP07585 359 aaKnown RBP3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 MELTFP08582 738 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 CCL2P13500 99 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 HOXB8P17481 243 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 PMCHP20382 165 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 SLC2A5P22732 501 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 GABRR2P28476 465 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 SHMT2P34897 504 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 UGT1A3P35503 534 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 NPBWR2P48146 333 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 DSCR10P59022 87 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 TNNC1P63316 161 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 CCDC173Q0VFZ6 552 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 NCF4Q15080 339 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 SF3A2Q15428 464 aaKnown RBP3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 PARP15Q460N3 678 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 SPESP1Q6UW49 350 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 PIANPQ8IYJ0 282 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 PDIK1LQ8N165 341 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 OR56A4Q8NGH8 313 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 OR2A12Q8NGT7 310 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 OR2G2Q8NGZ5 317 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 OR5B3Q8NH48 314 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 RASL10AQ92737 203 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 NOL4LQ96MY1 436 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 FOXN4Q96NZ1 517 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 SRXN1Q9BYN0 137 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 PRRG3Q9BZD7 231 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 ACTR6Q9GZN1 396 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 RETNQ9HD89 108 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 PRSS16Q9NQE7 514 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 OR1A1Q9P1Q5 309 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 B4GALT7Q9UBV7 327 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 MMP17Q9ULZ9 603 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 SAR1BQ9Y6B6 198 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 FGD6Q6ZV73 1430 aa3.43□□□□□ -1.86
HMGB1P48-201ENST00000446155 ZNF518AQ6AHZ1 1483 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 MLH3Q9UHC1 1453 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 CNTNAP1P78357 1384 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 LRP5O75197 1615 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 RNF17Q9BXT8 1623 aaKnown RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 IGLV3-22A0A075B6J6 115 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 IGKV1D-8A0A087WSZ0 117 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 FAM231BA6NCW3 169 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 A8MUA0 341 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 PDZK1P1A8MUH7 402 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 E9PAM4 449 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 CDC7O00311 574 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 SAP18O00422 153 aaKnown RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 HSBP1O75506 76 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 EEDO75530 441 aaKnown RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 FARS2O95363 451 aaKnown RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 CLIC3O95833 236 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 CD160O95971 181 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms