RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 FAM81AQ8TBF8 368 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 CXorf40AQ8TE69 158 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 ELMO1Q92556 727 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 SGK3Q96BR1 496 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR2M2Q96R28 347 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 KCTD14Q9BQ13 255 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 NEK6Q9HC98 313 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 RAB20Q9NX57 234 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC25A37Q9NYZ2 338 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 XCL2Q9UBD3 114 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 NUFIP1Q9UHK0 495 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 PRO0461Q9UI25 63 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 LSM7Q9UK45 103 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 PITPNC1Q9UKF7 332 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 PACSIN2Q9UNF0 486 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 TRAPPC4Q9Y296 219 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 PIKFYVEQ9Y2I7 2098 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 DIP2BQ9P265 1576 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 PTPRMP28827 1452 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 NINLQ9Y2I6 1382 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 LRRIQ3A6PVS8 624 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 TCP11X1B4DZS4 312 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 ERVV-1B6SEH8 477 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 DLGAP1O14490 977 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 AIM2O14862 343 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 CLOCKO15516 846 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 CA11O75493 328 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 EIF3GO75821 320 aaKnown RBP eCLIP2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 CLIC3O95833 236 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 HOXC4P09017 264 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF43P17038 809 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 CDKN1BP46527 198 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 TFPI2P48307 235 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 TMED10P49755 219 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 CCNHP51946 323 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 UGT2B15P54855 530 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 UCNP55089 124 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 ACTA2P62736 377 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 ACTG2P63267 376 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 ACTC1P68032 377 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 ACTA1P68133 377 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 AQP6Q13520 282 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 PSG5Q15238 335 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 GTPBP8Q8N3Z3 284 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 HSD17B11Q8NBQ5 300 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR2G3Q8NGZ4 309 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR5B3Q8NH48 314 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC7A13Q8TCU3 470 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 DTX3LQ8TDB6 740 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 BLOC1S5Q8TDH9 187 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 GEMIN6Q8WXD5 167 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 PIBF1Q8WXW3 757 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 DNAJC19Q96DA6 116 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF285Q96NJ3 590 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 PANX1Q96RD7 426 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 CHP1Q99653 195 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC29A1Q99808 456 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 UGT1A7Q9HAW7 530 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 UGT1A10Q9HAW8 530 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 UGT1A8Q9HAW9 530 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF160Q9HCG1 818 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLCO1B3Q9NPD5 702 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 RABL2AQ9UBK7 228 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 CACNG2Q9Y698 323 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 MYO15BQ96JP2 1530 aa2.39□□□□□ -2.03
TRAPPC13-204ENST00000438419 MTCL1Q9Y4B5 1905 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 CNTNAP1P78357 1384 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 CIB4A0PJX0 185 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF726A6NNF4 738 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 F6UB75 175 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 H3BNH8 94 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 DNALI1O14645 258 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC31A2O15432 143 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 CDH16O75309 829 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 TSPAN13O95857 204 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 KRT14P02533 472 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 PSG2P11465 335 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 RCC1P18754 421 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 FGF8P55075 233 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 MECOMQ03112 1051 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF92Q03936 586 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 GBE1Q04446 702 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 SMARCB1Q12824 385 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 ANKRD26P1Q6NSI1 321 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF621Q6ZSS3 439 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 COX15Q7KZN9 410 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 CENPQQ7L2Z9 268 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 ENTHD1Q8IYW4 607 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 LIX1Q8N485 282 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 Q8N9L7 120 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 CCDC148Q8NFR7 591 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR7G2Q8NG99 324 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR10G9Q8NGN4 311 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 RHEBL1Q8TAI7 183 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 ACMSDQ8TDX5 336 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 TMEM158Q8WZ71 300 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC38A4Q969I6 547 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 TMEM54Q969K7 222 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 MCUR1Q96AQ8 359 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms