RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 ISCA2Q86U28 154 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 SUMF1Q8NBK3 374 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 OR9A4Q8NGU2 314 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 TRUB1Q8WWH5 349 aaKnown RBP4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 GTF3AQ92664 365 aaKnown RBP4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 CDS1Q92903 461 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 MOCOSQ96EN8 888 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 CMTM7Q96FZ5 175 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 TRIM51Q9BSJ1 452 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 ING2Q9H160 280 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 CENPHQ9H3R5 247 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 TMEM38AQ9H6F2 299 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 C8orf4Q9NR00 106 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 SAMSN1Q9NSI8 373 aaKnown RBP4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 INTS9Q9NV88 658 aaKnown RBP4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 MCUBQ9NWR8 336 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 RSPH14Q9UHP6 348 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 COPS3Q9UNS2 423 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 VDAC3Q9Y277 283 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 WIF1Q9Y5W5 379 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 SELENOKQ9Y6D0 94 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 ABCB11O95342 1321 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 CDHR2Q9BYE9 1310 aa4.44□□□□□ -1.7
HMGB3P10-201ENST00000434734 A0A1B0GTI1 187 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 SMIM35A0A1B0GVV1 85 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 RPS10-NUDT3A0A1W2PQS6 291 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 C11orf98E9PRG8 122 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 GOLGA6L19H0YKK7 550 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 CCL21O00585 134 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 PRKNO60260 465 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 RAMP1O60894 148 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 EEDO75530 441 aaKnown RBP4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 PEX11BO96011 259 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 NGFP01138 241 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 IGHV4-39P01824 125 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 TACSTD2P09758 323 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 ZP3P21754 424 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 MPGP29372 298 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 FOXN2P32314 431 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 DLX5P56178 289 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 ARL16Q0P5N6 197 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 CDC20Q12834 499 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 DYNC1I2Q13409 638 aaKnown RBP4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 GPNMBQ14956 572 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 CCDC6Q16204 474 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 C2CD6Q53TS8 623 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 GDPD4Q6W3E5 623 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 SLC13A5Q86YT5 568 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 TMEM251Q8N6I4 163 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 CCNYL1Q8N7R7 359 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 ACOT4Q8N9L9 421 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 CCDC112Q8NEF3 446 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 OR51A7Q8NH64 312 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 BLOC1S5Q8TDH9 187 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 GATAD1Q8WUU5 269 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 RASL10AQ92737 203 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 RORBQ92753 470 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 PSMG2Q969U7 264 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 YIPF6Q96EC8 236 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 NKX3-1Q99801 234 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 CIB1Q99828 191 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 FAM173AQ9BQD7 235 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 COPS4Q9BT78 406 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 BCL2L14Q9BZR8 327 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 R3HDMLQ9H3Y0 253 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 TUBB1Q9H4B7 451 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 NMUR1Q9HB89 426 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 TMBIM4Q9HC24 238 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 OCIAD1Q9NX40 245 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 SEC14L4Q9UDX3 406 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 RAB23Q9ULC3 237 aa4.43□□□□□ -1.7
HMGB3P10-201ENST00000434734 ARHGEF17Q96PE2 2063 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 TRBV7-9A0A0J9YWB2 115 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 SMIM28A0A1B0GU29 152 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 A0A1B0GUA9 196 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 SRRM3A6NNA2 597 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 H0Y980 276 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 J3QLI3 93 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 PLPP3O14495 311 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 BUB3O43684 328 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 NARSO43776 548 aaKnown RBP4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 SOX15O60248 233 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 TRAPPC6AO75865 159 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 MPZL1O95297 269 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 ZFYVE9O95405 1425 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 IL6P05231 212 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 LIFP15018 202 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 GPR183P32249 361 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 PTGDSP41222 190 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 OR10A3P58181 314 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 HERV-K104P61576 105 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 LSM6P62312 80 aaKnown RBP4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 TLE4Q04727 773 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 NAB1Q13506 487 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 PSG5Q15238 335 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 TRIP6Q15654 476 aaKnown RBP4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 ZIC1Q15915 447 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 SLC36A2Q495M3 483 aa4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 RBM48Q5RL73 367 aaKnown RBP4.42□□□□□ -1.7
HMGB3P10-201ENST00000434734 THOC7Q6I9Y2 204 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms