RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NUP37Q8NFH4 326 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 MS4A3Q96HJ5 214 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 TNFRSF13CQ96RJ3 184 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 BTBD10Q9BSF8 475 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 B3GAT2Q9NPZ5 323 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 TAS2R5Q9NYW4 299 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 ZNF224Q9NZL3 707 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 ACTR3BQ9P1U1 418 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 RIMS3Q9UJD0 308 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 A4GNTQ9UNA3 340 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 POFUT2Q9Y2G5 429 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 SVEP1Q4LDE5 3571 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 B9A039 149 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 J3KTA2 159 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 TLX2O43763 284 aaPredicted RBP13.14□□□□□ -0.31
USB1-202ENST00000423271 OR6A2O95222 327 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 CSF3P09919 207 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 CD79AP11912 226 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 FUT4P22083 530 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 MS4A2Q01362 244 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 PIGFQ07326 219 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 TRIM25Q14258 630 aaKnown RBP13.14□□□□□ -0.31
USB1-202ENST00000423271 C6orf52Q5T4I8 152 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 SLC35D2Q76EJ3 337 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 ZNF627Q7L945 461 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 TSEN54Q7Z6J9 526 aaKnown RBP13.14□□□□□ -0.31
USB1-202ENST00000423271 NKAIN4Q8IVV8 208 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 TMEM54Q969K7 222 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 CCDC124Q96CT7 223 aaKnown RBP13.14□□□□□ -0.31
USB1-202ENST00000423271 MPP4Q96JB8 637 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 PRRC1Q96M27 445 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 ZNF75AQ96N20 296 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 FOXB1Q99853 325 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 VRK1Q99986 396 aaPredicted RBP13.14□□□□□ -0.31
USB1-202ENST00000423271 POLR2J2Q9GZM3 115 aaKnown RBP13.14□□□□□ -0.31
USB1-202ENST00000423271 POLR2J3Q9H1A7 115 aaKnown RBP13.14□□□□□ -0.31
USB1-202ENST00000423271 PLK3Q9H4B4 646 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 ZNF442Q9H7R0 627 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 MEPEQ9NQ76 525 aaPredicted RBP13.14□□□□□ -0.31
USB1-202ENST00000423271 NANSQ9NR45 359 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 ZNF229Q9UJW7 825 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 FKBP7Q9Y680 259 aa13.14□□□□□ -0.31
USB1-202ENST00000423271 hCG_2039718K7EN88 272 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 RNF13O43567 381 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 ASAH2BP0C7U1 165 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 UMPSP11172 480 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 UGT2B15P54855 530 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 ZP4Q12836 540 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 SNTB2Q13425 540 aaKnown RBP13.13□□□□□ -0.31
USB1-202ENST00000423271 GSG1Q2KHT4 349 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 LCN8Q6JVE9 175 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 KRT80Q6KB66 452 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 PGM2L1Q6PCE3 622 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 CCDC36Q8IYA8 594 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 OR6X1Q8NH79 312 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 TMEM255BQ8WV15 326 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 PYURFQ96I23 114 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 C7orf34Q96L11 122 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 MDFIQ99750 246 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 CADM1Q9BY67 442 aaKnown RBP13.13□□□□□ -0.31
USB1-202ENST00000423271 SLC19A3Q9BZV2 496 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 MUC13Q9H3R2 512 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 GLTPQ9NZD2 209 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 RHCGQ9UBD6 479 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 ENPP4Q9Y6X5 453 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 COL6A5A8TX70 2615 aa13.13□□□□□ -0.31
USB1-202ENST00000423271 FBN1P35555 2871 aaKnown RBP13.12□□□□□ -0.31
USB1-202ENST00000423271 TMEM129A0AVI4 362 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 A8MV72 311 aaPredicted RBP13.12□□□□□ -0.31
USB1-202ENST00000423271 VWC2LB2RUY7 222 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 FFAR1O14842 300 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 DNAJC8O75937 253 aaPredicted RBP13.12□□□□□ -0.31
USB1-202ENST00000423271 ATP5HO75947 161 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 PRSS23O95084 383 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 SEMG1P04279 462 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 PATE4P0C8F1 98 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 THRBP10828 461 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 ZNF14P17017 642 aaPredicted RBP13.12□□□□□ -0.31
USB1-202ENST00000423271 ZNF16P17020 682 aaPredicted RBP13.12□□□□□ -0.31
USB1-202ENST00000423271 NPR2P20594 1047 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 GIPRP48546 466 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 PTDSS1P48651 473 aaKnown RBP13.12□□□□□ -0.31
USB1-202ENST00000423271 PPOXP50336 477 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 PDLIM4P50479 330 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 VLDLRP98155 873 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 DAG1Q14118 895 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 CARTPTQ16568 116 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 MSMPQ1L6U9 139 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 NANOGNBQ7Z5D8 188 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 DHFR2Q86XF0 187 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 CDK20Q8IZL9 346 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 OFCC1Q8IZS5 231 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 ZCCHC24Q8N2G6 241 aaKnown RBP13.12□□□□□ -0.31
USB1-202ENST00000423271 FGFBP3Q8TAT2 258 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 ASB9Q96DX5 294 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 FNDC11Q9BVV2 318 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 MALRD1Q5VYJ5 2156 aa13.12□□□□□ -0.31
USB1-202ENST00000423271 TCRBV5S2A0A599 114 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms