RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 A0A087WUU8 490 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 CCNOP22674 350 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 MALLQ13021 153 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 HES5Q5TA89 166 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 YRDCQ86U90 279 aaKnown RBP7.77□□□□□ -1.17
SYNE1-211ENST00000413186 CNEP1R1Q8N9A8 125 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 SDR9C7Q8NEX9 313 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 SPTSSAQ969W0 71 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 CPNE5Q9HCH3 593 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 PCDHB16Q9NRJ7 776 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 FAM186AA6NE01 2351 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 PCM1Q15154 2024 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 A0A1W2PQD3 144 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 LRRTM2O43300 516 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 SLC16A7O60669 478 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 SLC3A1Q07837 685 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 HIST2H3PS2Q5TEC6 136 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 TBPL2Q6SJ96 375 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 SPATC1Q76KD6 591 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 IGFN1Q86VF2 1251 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 NKAIN4Q8IVV8 208 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 OR4C3Q8NH37 302 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 TMIGD2Q96BF3 282 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 UNKLQ9H9P5 680 aaKnown RBP7.77□□□□□ -1.17
SYNE1-211ENST00000413186 ZFP64Q9NPA5 681 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 EXOSC3Q9NQT5 275 aaKnown RBP7.77□□□□□ -1.17
SYNE1-211ENST00000413186 PSORS1C1Q9UIG5 152 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 RASD1Q9Y272 281 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 B3GALT5Q9Y2C3 310 aa7.77□□□□□ -1.17
SYNE1-211ENST00000413186 NOSIPQ9Y314 301 aaKnown RBP7.77□□□□□ -1.17
SYNE1-211ENST00000413186 SCN3AQ9NY46 2000 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 SEC14L2O76054 403 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 F13BP05160 661 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 CELP19835 753 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 GCH1P30793 250 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 PYCR1P32322 319 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 MLLT11Q13015 90 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 VAMP3Q15836 100 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 TMEM41BQ5BJD5 291 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF766Q5HY98 468 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 DCAF10Q5QP82 559 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 SLC35D2Q76EJ3 337 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 PDZD9Q8IXQ8 264 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 SYT14Q8NB59 555 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 OR5T1Q8NG75 326 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 NEIL3Q8TAT5 605 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 GIMAP5Q96F15 307 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 PGAM5Q96HS1 289 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 ARL5BQ96KC2 179 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 DMRTB1Q96MA1 342 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 RASL10BQ96S79 203 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 CHIAQ9BZP6 476 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 CHST11Q9NPF2 352 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 TRABD2BA6NFA1 517 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 CRYM-AS1A6NIL9 109 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 FIGNL2A6NMB9 653 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 GATBO75879 557 aaKnown RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 SCAF4O95104 1147 aaKnown RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 TXNDC12O95881 172 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 PTTG1O95997 202 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 FRKP42685 505 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 OR12D2P58182 307 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 INSM1Q01101 510 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 SYT6Q5T7P8 510 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 EIF5AL1Q6IS14 154 aaKnown RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 MEPCEQ7L2J0 689 aaKnown RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 LHFPL3Q86UP9 236 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 TAAR8Q969N4 342 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 GABARAPL3Q9BY60 117 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 UFSP2Q9NUQ7 469 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 ASCC3Q8N3C0 2202 aaKnown RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 LOC102725191A0A1B0GVB3 256 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 C1orf196B1AJZ1 125 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 J3QRK9 145 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF254O75437 659 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 SMIM18P0DKX4 95 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 HNF1AP20823 631 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 HTR2AP28223 471 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 CLDN17P56750 224 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 PCBP3P57721 371 aaKnown RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 SNRPGP62308 76 aaKnown RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 PSG6Q00889 435 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 PIGFQ07326 219 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 SYT14P1Q58G82 188 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 NAXEQ8NCW5 288 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 TMEM52Q8NDY8 209 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 OR10G3Q8NGC4 313 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 RHOXF1Q8NHV9 184 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 MITD1Q8WV92 249 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 PRR14Q9BWN1 585 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 C12orf10Q9HB07 376 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 CDH20Q9HBT6 801 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 FLVCR2Q9UPI3 526 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF175Q9Y473 711 aa7.76□□□□□ -1.17
SYNE1-211ENST00000413186 TMEM184BQ9Y519 407 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-211ENST00000413186 TEX13CA0A0J9YWL9 993 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 PRKNO60260 465 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 RGS9O75916 674 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 PTHP01270 115 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms