RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SEC61GP60059 68 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MLLT11Q13015 90 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 DUSP8Q13202 625 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FAM98CQ17RN3 349 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PABPC1L2AQ5JQF8 200 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FAHD2BQ6P2I3 314 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF534Q76KX8 674 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 LYG2Q86SG7 212 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FBXO16Q8IX29 292 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FNDC8Q8TC99 324 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SLC7A10Q9NS82 523 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 GDF2Q9UK05 429 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ZMYM4Q5VZL5 1548 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 A0A1W2PPM1 405 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TMX2-CTNND1H3BSU7 103 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SPINT1O43278 529 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FBXO24O75426 580 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 GPANK1O95872 356 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 USP17L8P0C7I0 530 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 KCNE1P15382 129 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ARSBP15848 533 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ICAM3P32942 547 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 KLF3P57682 345 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 LCN10Q6JVE6 187 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 KLHDC10Q6PID8 442 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 NDUFAF7Q7L592 441 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CILP2Q8IUL8 1156 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR6V1Q8N148 313 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CHST13Q8NET6 341 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR2Z1Q8NG97 314 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR52B6Q8NGF0 335 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR51F2Q8NH61 342 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 DAZLQ92904 295 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FAM89AQ96GI7 184 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FUBP3Q96I24 572 aaKnown RBP eCLIP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 C12orf42Q96LP6 360 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR8B4Q96RC9 309 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SLC29A3Q9BZD2 475 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 RNF186Q9NXI6 227 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 EHFQ9NZC4 300 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CACNG5Q9UF02 275 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 STARD10Q9Y365 291 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF724A8MTY0 619 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 LYRM1O43325 122 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CDC14BO60729 498 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MRPS14O60783 128 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 GPX5O75715 221 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CHRM4P08173 479 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MALP21145 153 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 KLRK1P26718 216 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MIPP30301 263 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 RPL29P47914 159 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF140P52738 457 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SQSTM1Q13501 440 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MARCH8Q5T0T0 291 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 AGBL5Q8NDL9 886 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR10P1Q8NGE3 313 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR4D9Q8NGE8 314 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 GPR150Q8NGU9 434 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR5R1Q8NH85 324 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SLC25A46Q96AG3 418 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MOB3AQ96BX8 217 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PYURFQ96I23 114 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FBXL20Q96IG2 436 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 HRASLS5Q96KN8 279 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FBXL18Q96ME1 805 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM147Q9BVK8 224 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SLC46A2Q9BY10 475 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 HDAC8Q9BY41 377 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PARD6GQ9BYG4 376 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SLC2A4RGQ9NR83 387 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OBP2AQ9NY56 170 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 NPTNQ9Y639 398 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 RAPGEF6Q8TEU7 1601 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MN1Q10571 1320 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TRAV18A0A075B6X5 111 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 JTBO76095 146 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 BGLAPP02818 100 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FAM163BP0C2L3 166 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR8G3PP0DMU2 310 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 M6PRP20645 277 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 DDOSTP39656 456 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 GNB1P62873 340 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PLA1AQ53H76 456 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 DNLZQ5SXM8 178 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MPZL3Q6UWV2 235 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CPOQ8IVL8 374 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PLPP7Q8NBV4 271 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF485Q8NCK3 441 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR4C13Q8NGP0 309 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MARCH1Q8TCQ1 289 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ASB13Q8WXK3 278 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR2V2Q96R30 315 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CGREF1Q99674 301 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 INPP5EQ9NRR6 644 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 LHX3Q9UBR4 397 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF185O15231 689 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CAPN15O75808 1086 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms