RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 OR1J2Q8NGS2 313 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 OR5AK3PQ8NH89 298 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 SUN3Q8TAQ9 357 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 GPBAR1Q8TDU6 330 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 UBE2E3Q969T4 207 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 SLAMF9Q96A28 289 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 ZCCHC2Q9C0B9 1178 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 SLC6A16Q9GZN6 736 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 METTL9Q9H1A3 318 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 RHOFQ9HBH0 211 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 MRPS30Q9NP92 439 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 C19orf12Q9NSK7 152 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 CUTCQ9NTM9 273 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 ANKRD10Q9NXR5 420 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 TAAR2Q9P1P5 351 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 DEC1Q9P2X7 70 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 LHX3Q9UBR4 397 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 LPAR3Q9UBY5 353 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 CACFD1Q9UGQ2 172 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 MMP17Q9ULZ9 603 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 PIKFYVEQ9Y2I7 2098 aa9.7□□□□□ -0.86
NIF3L1-204ENST00000409357 PLXND1Q9Y4D7 1925 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 SEC14L6B5MCN3 397 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 F5H0A9 414 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 TSTD3H0UI37 97 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 CLDN4O14493 209 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 ADAM10O14672 748 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 SOCS5O75159 536 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 ZNF821O75541 412 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 SLCO2B1O94956 709 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 PTBP3O95758 552 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 EPPINO95925 133 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 CISD3P0C7P0 127 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 SRMP19623 302 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 S1PR1P21453 382 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 C5AR1P21730 350 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 ACKR3P25106 362 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 S100A2P29034 98 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 DDTP30046 118 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 MAGEB1P43366 347 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 DVL1P1P54792 670 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 PCBP4P57723 403 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 ALKBH1Q13686 389 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 C4orf46Q504U0 113 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 NSUN5P2Q63ZY6 315 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 NPSR1Q6W5P4 371 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 PAQR4Q8N4S7 273 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 FAM160A2Q8N612 972 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 FRMD1Q8N878 549 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 INO80EQ8NBZ0 244 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 C17orf47Q8NEP4 570 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 BBS1Q8NFJ9 593 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 LYPD6BQ8NI32 183 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 RSC1A1Q92681 617 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 PMM1Q92871 262 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 CLCC1Q96S66 551 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 MAP3K3Q99759 626 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 WFDC6Q9BQY6 131 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 ORAI3Q9BRQ5 295 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 NAA11Q9BSU3 229 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 SUV39H2Q9H5I1 410 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 DMRT3Q9NQL9 472 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 SLC17A5Q9NRA2 495 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 GAR1Q9NY12 217 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 V9GY05 133 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 CEP192Q8TEP8 1941 aa9.69□□□□□ -0.86
NIF3L1-204ENST00000409357 TNRC6BQ9UPQ9 1833 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 ELOA3CA0A087WX78 387 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 M0R3H8 397 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 PSMD9O00233 223 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 TCAPO15273 167 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 FADS1O60427 444 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 APBB3O95704 486 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 FCGR3AP08637 254 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 ITGA5P08648 1049 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 OR4E1P0C645 316 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 NQO2P16083 231 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 NDUFB7P17568 137 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 SLC2A5P22732 501 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 MPZP25189 248 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 SLC26A5P58743 744 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 TAS2R50P59544 299 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 SPEM2Q0P670 501 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 RHEBQ15382 184 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 SYPL1Q16563 259 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 PRSS53Q2L4Q9 553 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 FAHD2BQ6P2I3 314 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 AGTRAPQ6RW13 159 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 FCRLAQ7L513 359 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 C11orf96Q7Z7L8 435 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 ZNF383Q8NA42 475 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 STEAP2Q8NFT2 490 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 TSTD1Q8NFU3 115 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 OR56B1Q8NGI3 324 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 OR9A4Q8NGU2 314 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 OR2G2Q8NGZ5 317 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 SYNPRQ8TBG9 265 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 PLD4Q96BZ4 506 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 FAHD2AQ96GK7 314 aa9.68□□□□□ -0.86
NIF3L1-204ENST00000409357 RBM18Q96H35 190 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms