RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 ANKRD19PQ9H560 264 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 KCNJ16Q9NPI9 418 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 CYSLTR2Q9NS75 346 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ARRDC5A6NEK1 342 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 IMPA2O14732 288 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 BET1O15155 118 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 AHSA1O95433 338 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 RENP00797 406 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ACHEP22303 614 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 AGFG1P52594 562 aaKnown RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 SKP2Q13309 424 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 MFSD13AQ14CX5 517 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 RBMS2Q15434 407 aaKnown RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ZNF687Q8N1G0 1237 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 IL20Q9NYY1 176 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 CTSFQ9UBX1 484 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 A0A0C4DFX4 3053 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 SCN5AQ14524 2016 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ZNF593O00488 134 aaPredicted RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 PMP2P02689 132 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 SFTPBP07988 381 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 FGF9P31371 208 aaPredicted RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 RPS15AP62244 130 aaKnown RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 OR2B11Q5JQS5 317 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ZNF585AQ6P3V2 769 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 SHISA6Q6ZSJ9 500 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 HIST2H3AQ71DI3 136 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 PGAP1Q75T13 922 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 CRIPAKQ8N1N5 446 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ZNF248Q8NDW4 579 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 BPIFCQ8NFQ6 507 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ATOH1Q92858 354 aaPredicted RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 EPHX3Q9H6B9 360 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 LDAHQ9H6V9 325 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 PRDM7Q9NQW5 492 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 PURGQ9UJV8 347 aaKnown RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ANKRD36A6QL64 1941 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 A0A0B4J2A0 478 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 LINC00862A6NCI5 91 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 SRMP19623 302 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 S100A7P31151 101 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 LIMK1P53667 647 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 NRG3P56975 720 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 MRPS10P82664 201 aaKnown RBP10.94□□□□□ -0.66
HMGB1-206ENST00000405805 ZNF101Q8IZC7 436 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 C9orf62Q8N4C0 152 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 RFLNBQ8N5W9 214 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 OR2T4Q8NH00 348 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 RAB7BQ96AH8 199 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 ZFYVE21Q9BQ24 234 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 PTDSS2Q9BVG9 487 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 MEPEQ9NQ76 525 aaPredicted RBP10.94□□□□□ -0.66
HMGB1-206ENST00000405805 SHPKQ9UHJ6 478 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 CASP8AP2Q9UKL3 1982 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 M0QYG6 137 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 SYT5O00445 386 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 CCSO14618 274 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 AKR1C4P17516 323 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 LIMS1P48059 325 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 MLF2Q15773 248 aaPredicted RBP10.94□□□□□ -0.66
HMGB1-206ENST00000405805 ARHGAP40Q5TG30 622 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 OR5T1Q8NG75 326 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 YIPF5Q969M3 257 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.94□□□□□ -0.66
HMGB1-206ENST00000405805 HEBP2Q9Y5Z4 205 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 TSC2P49815 1807 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 A0A0A6YYD5 115 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 KLF8O95600 359 aaPredicted RBP10.94□□□□□ -0.66
HMGB1-206ENST00000405805 RECKO95980 971 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 PGAM2P15259 253 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 RUNX2Q13950 521 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 CDNFQ49AH0 187 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 CD276Q5ZPR3 534 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 GPR139Q6DWJ6 353 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 OR7E24Q6IFN5 339 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 NHLRC1Q6VVB1 395 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 LRRC69Q6ZNQ3 347 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 TERB2Q8NHR7 220 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 WNT2BQ93097 391 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 RSPRY1Q96DX4 576 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 SCMH1Q96GD3 660 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 NRSN2Q9GZP1 204 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 BCL2L10Q9HD36 194 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 CYP8B1Q9UNU6 501 aa10.94□□□□□ -0.66
HMGB1-206ENST00000405805 AHCTF1Q8WYP5 2266 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 KDM4EB2RXH2 506 aaPredicted RBP10.93□□□□□ -0.66
HMGB1-206ENST00000405805 NPIPB8E9PQR5 432 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 AIPO00170 330 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 SCDO00767 359 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 BHLHE40O14503 412 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 LILRB3O75022 631 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 MOSPD3O75425 235 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 CRTAPO75718 401 aaPredicted RBP10.93□□□□□ -0.66
HMGB1-206ENST00000405805 F12P00748 615 aaPredicted RBP10.93□□□□□ -0.66
HMGB1-206ENST00000405805 ATP1B1P05026 303 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 QDPRP09417 244 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 PTGFRP43088 359 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 SELENOPP49908 381 aa10.93□□□□□ -0.66
HMGB1-206ENST00000405805 OR10K2Q6IF99 312 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms