RNA–Protein interactions for RNA: ENST00000404724.7

CDC45-202, Transcript of cell division cycle 45, humanhuman

TSL 2 BASIC

Gene CDC45, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45-202ENST00000404724 MGAT4BQ9UQ53 548 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 SPIN1Q9Y657 262 aaPredicted RBP11.78□□□□□ -0.52
CDC45-202ENST00000404724 A0A087WUJ7 227 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 A0A087WUU8 490 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 G3V2T6 193 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 DNPH1O43598 174 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 FAM157CP0CG43 387 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 PNMTP11086 282 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 ZNF23P17027 643 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 HTR3AP46098 478 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 SELENOPP49908 381 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 ARHGDIAP52565 204 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 SLC35A1P78382 337 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 LAPTM4AQ15012 233 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 SEC23BQ15437 767 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 OR7E24Q6IFN5 339 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 TBPL2Q6SJ96 375 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 PAQR6Q6TCH4 344 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 GPAT4Q86UL3 456 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 ZDHHC13Q8IUH4 622 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 HS3ST5Q8IZT8 346 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 KDM8Q8N371 416 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 OR5K1Q8NHB7 308 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 KCNK17Q96T54 332 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 NELFAQ9H3P2 528 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 C12orf10Q9HB07 376 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 UPB1Q9UBR1 384 aa11.78□□□□□ -0.52
CDC45-202ENST00000404724 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 SH3PXD2BA1X283 911 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 ZNF503-AS2A6NEH8 195 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 SAC3D1A6NKF1 404 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 VWC2LB2RUY7 222 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 CASQ2O14958 399 aaPredicted RBP11.77□□□□□ -0.53
CDC45-202ENST00000404724 ZNF208O43345 1280 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 CELA3BP08861 270 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 PRKACGP22612 351 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 CXCR1P25024 350 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 CLK1P49759 484 aaKnown RBP11.77□□□□□ -0.53
CDC45-202ENST00000404724 EFNA4P52798 201 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.532e-6■■■■□ 24.8
CDC45-202ENST00000404724 GK3PQ14409 553 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 MICAQ29983 383 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 ZNF544Q6NX49 715 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 SHQ1Q6PI26 577 aaKnown RBP11.77□□□□□ -0.53
CDC45-202ENST00000404724 ZCCHC24Q8N2G6 241 aaKnown RBP11.77□□□□□ -0.53
CDC45-202ENST00000404724 TMEM255BQ8WV15 326 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 ACOT11Q8WXI4 607 aaPredicted RBP11.77□□□□□ -0.53
CDC45-202ENST00000404724 DDIT4LQ96D03 193 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 NRBF2Q96F24 287 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 CIB1Q99828 191 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 ZNF426Q9BUY5 554 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 TMCC3Q9ULS5 477 aa11.77□□□□□ -0.53
CDC45-202ENST00000404724 A0A096LPE4 126 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 A0A1W2PPZ6 126 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 AQP7P3A6NL99 342 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 UPK3AO75631 287 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 MPGP29372 298 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 CALCRP30988 508 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 GGTLC2Q14390 218 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 TRIP10Q15642 601 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 LRRC36Q1X8D7 754 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 LPCAT4Q643R3 524 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 TTC33Q6PID6 262 aaPredicted RBP11.76□□□□□ -0.53
CDC45-202ENST00000404724 ZNF730Q6ZMV8 503 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 AAED1Q7RTV5 226 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 EPHX4Q8IUS5 362 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 WDFY1Q8IWB7 410 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 RNF113BQ8IZP6 322 aaKnown RBP11.76□□□□□ -0.53
CDC45-202ENST00000404724 SVOPLQ8N434 492 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 GIPC3Q8TF64 312 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 TMEM239Q8WW34 195 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 EME1Q96AY2 570 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 TMEM45BQ96B21 275 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 MSI2Q96DH6 328 aaKnown RBP11.76□□□□□ -0.53
CDC45-202ENST00000404724 ZNF837Q96EG3 531 aaPredicted RBP11.76□□□□□ -0.53
CDC45-202ENST00000404724 FOXN4Q96NZ1 517 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 CHODLQ9H9P2 273 aa11.76□□□□□ -0.53
CDC45-202ENST00000404724 PDP1Q9P0J1 537 aaPredicted RBP11.76□□□□□ -0.53
CDC45-202ENST00000404724 EIF1BO60739 113 aaKnown RBP11.75□□□□□ -0.53
CDC45-202ENST00000404724 CCNB2O95067 398 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 F12P00748 615 aaPredicted RBP11.75□□□□□ -0.53
CDC45-202ENST00000404724 USF1P22415 310 aaPredicted RBP11.75□□□□□ -0.53
CDC45-202ENST00000404724 APOBEC3AP31941 199 aaPredicted RBP11.75□□□□□ -0.53
CDC45-202ENST00000404724 RBM34P42696 430 aaKnown RBP11.75□□□□□ -0.53
CDC45-202ENST00000404724 TBRG1Q3YBR2 411 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 MBOAT2Q6ZWT7 520 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 C1orf162Q8NEQ5 155 aaPredicted RBP11.75□□□□□ -0.53
CDC45-202ENST00000404724 OR4K5Q8NGD3 323 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 NRG4Q8WWG1 115 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 CDC42EP3Q9UKI2 254 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 AMDHD2Q9Y303 409 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 IGKV1D-42A0A075B6H8 117 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 OR10H3O60404 316 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 IFNA2P01563 188 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 IGFBP1P08833 259 aaPredicted RBP11.75□□□□□ -0.53
CDC45-202ENST00000404724 SLC25A16P16260 332 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 PEX2P28328 305 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 IL2RGP31785 369 aa11.75□□□□□ -0.53
CDC45-202ENST00000404724 MAP2K6P52564 334 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms