RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CEACAM16Q2WEN9 425 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PGGHGQ32M88 737 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 FAM205BPQ63HN1 556 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 GPR139Q6DWJ6 353 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ACSM5Q6NUN0 579 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SLC25A47Q6Q0C1 308 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SEZ6L2Q6UXD5 910 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 GPR137CQ8N3F9 429 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 CBR4Q8N4T8 237 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 OR6N1Q8NGY5 312 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 DNAJC9Q8WXX5 260 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 MCHR2Q969V1 340 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ALG12Q9BV10 488 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ULBP2Q9BZM5 246 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 KRT84Q9NSB2 600 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 TAS2R16Q9NYV7 291 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 VSX1Q9NZR4 365 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 KIF17Q9P2E2 1029 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 STX18Q9P2W9 335 aaKnown RBP10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 GRHPRQ9UBQ7 328 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 UGT2A1Q9Y4X1 527 aa10.9□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ANKHD1Q8IWZ3 2542 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC22A23A1A5C7 686 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PRSS37A4D1T9 235 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 A6NIZ1 184 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNF587BE7ETH6 402 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 C16orf97H3BN30 126 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 H3BN98 237 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 DCTN6O00399 190 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 DLGAP1O14490 977 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 DHHO43323 396 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RAD51DO75771 328 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SEC14L2O76054 403 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 THBDP07204 575 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 QDPRP09417 244 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 IGFBP5P24593 272 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 GIPRP48546 466 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RPS6KA3P51812 740 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CLRN1P58418 232 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RAP1BP61224 184 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RAP1AP62834 184 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ARF1P84077 181 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CDK5Q00535 292 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC35F1Q5T1Q4 408 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 C10orf128Q5T292 105 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TMEM236Q5W0B7 351 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 LPCAT4Q643R3 524 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 HIST2H2BCQ6DN03 193 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 BHLHA15Q7RTS1 189 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 HDDC2Q7Z4H3 204 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 DMRTC2Q8IXT2 367 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NPEPL1Q8NDH3 523 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR2T33Q8NG76 320 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR52L1Q8NGH7 329 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR1K1Q8NGR3 316 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR4K13Q8NH42 304 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 LINC01560Q8TB33 94 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 HTRA1Q92743 480 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 BCL2L2Q92843 193 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 KISS1RQ969F8 398 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 S100PBPQ96BU1 408 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 BOD1Q96IK1 185 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 GABARAPL3Q9BY60 117 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NDEL1Q9GZM8 345 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNF556Q9HAH1 456 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC25A19Q9HC21 320 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PLEKHB1Q9UF11 243 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 GPR52Q9Y2T5 361 aa10.89□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR6C68A6NDL8 312 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNF503-AS2A6NEH8 195 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZAR1LA6NP61 321 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CASQ2O14958 399 aaPredicted RBP10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 IDH3BO43837 385 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CTLA4P16410 223 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CDH2P19022 906 aaPredicted RBP10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 POU1F1P28069 291 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PEX2P28328 305 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ALDH3A2P51648 485 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CRISP1P54107 249 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CD47Q08722 323 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 GINS1Q14691 196 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 STK11Q15831 433 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ETFDHQ16134 617 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 HIKESHIQ53FT3 197 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FOXL2NBQ6ZUU3 175 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNF627Q7L945 461 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ADCK1Q86TW2 530 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 WDR31Q8NA23 367 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC37A3Q8NCC5 494 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 C1orf162Q8NEQ5 155 aaPredicted RBP10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SDR9C7Q8NEX9 313 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TEX47Q8TBZ9 253 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NABP1Q96AH0 204 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 MUS81Q96NY9 551 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 WFIKKN1Q96NZ8 548 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TSSK2Q96PF2 358 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 MBOAT4Q96T53 435 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NMNAT3Q96T66 252 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RBM4BQ9BQ04 359 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms