RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 YTHDF2Q9Y5A9 579 aaKnown RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 C1orf232A0A0U1RR37 186 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 A0A1B0GUL7 405 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 LOC105371267A0A1B0GV96 52 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 TMEM120BA0PK00 339 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 MBLAC1A4D2B0 266 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ARHGEF35A5YM69 484 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 VSTM2BA6NLU5 285 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 TMEM210A6NLX4 147 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ANKRD30BLA7E2S9 258 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 C12orf71A8MTZ7 269 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 HAS3O00219 553 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 CALUO43852 315 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SS18L1O75177 396 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 CDH16O75309 829 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 WBP4O75554 376 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 STAG3L2P0CL84 134 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SLC2A3P11169 496 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 HOXB8P17481 243 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 PTNP21246 168 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ATP6V1C1P21283 382 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 MSR1P21757 451 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SPAM1P38567 509 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 MAGEA5P43359 124 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 RPS5P46782 204 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 CSNK1EP49674 416 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 CEBPDP49716 269 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 PLK1P53350 603 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 OSTNP61366 133 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SELENOTP62341 195 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 HSF2Q03933 536 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 BST1Q10588 318 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 MERTKQ12866 999 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 FADDQ13158 208 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ITGB3BPQ13352 177 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 CASP8Q14790 479 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 PON2Q15165 354 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 KLF17Q5JT82 389 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 THEM4Q5T1C6 240 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 MLIPQ5VWP3 458 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 NCR3LG1Q68D85 454 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SPECC1LQ69YQ0 1117 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 THOC7Q6I9Y2 204 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 TWF2Q6IBS0 349 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SLC25A25Q6KCM7 469 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 TMEM53Q6P2H8 277 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 FAHD2BQ6P2I3 314 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ACOT7LQ6ZUV0 252 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 GDPD3Q7L5L3 318 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 VTCN1Q7Z7D3 282 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 LINC00523Q86TU6 105 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 STX12Q86Y82 276 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ECHDC2Q86YB7 292 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF547Q8IVP9 402 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 MISPQ8IVT2 679 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 LRRC75A-AS1Q8N1F1 130 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 UBE2J2Q8N2K1 259 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 BCORP1Q8N888 145 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ASCC1Q8N9N2 400 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 FAM71CQ8NEG0 241 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 OR4K14Q8NGD5 310 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 OR9K2Q8NGE7 335 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 OR56B4Q8NH76 319 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 NDNFQ8TB73 568 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ENKURQ8TC29 256 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SLC2A14Q8TDB8 520 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ACER1Q8TDN7 264 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 GLYATL2Q8WU03 294 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 TOP1MTQ969P6 601 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 MCUR1Q96AQ8 359 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 OPTNQ96CV9 577 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 CHMP6Q96FZ7 201 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 FAHD2AQ96GK7 314 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SNF8Q96H20 258 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 PRRC1Q96M27 445 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 PANX1Q96RD7 426 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 NPY6RQ99463 290 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 BPIFA3Q9BQP9 254 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SLC30A2Q9BRI3 323 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ALG12Q9BV10 488 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 FICDQ9BVA6 458 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 DUSP16Q9BY84 665 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 POTEKPQ9BYX7 375 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 API5Q9BZZ5 524 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 OR52A5Q9H2C5 316 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 BLZF1Q9H2G9 400 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 CDC42EP4Q9H3Q1 356 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 FBXO44Q9H4M3 255 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 RGCCQ9H4X1 137 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ACTR8Q9H981 624 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ROPN1Q9HAT0 212 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 ZFP14Q9HCL3 533 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 PDP1Q9P0J1 537 aaPredicted RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 DEC1Q9P2X7 70 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 MRPS33Q9Y291 106 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 OARD1Q9Y530 152 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 MAD1L1Q9Y6D9 718 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 BZW2Q9Y6E2 419 aaKnown RBP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 SF3B1O75533 1304 aaKnown RBP eCLIP1.55□□□□□ -2.16
TRAV40-201ENST00000390467 TTC21AQ8NDW8 1320 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms