RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 NTN4Q9HB63 628 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 IL20Q9NYY1 176 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 PDP1Q9P0J1 537 aaPredicted RBP11.61□□□□□ -0.55
CKAP2-202ENST00000378034 SLC25A15Q9Y619 301 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 CDH10Q9Y6N8 788 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 ARPC4-TTLL3A0A0A6YYG9 625 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 XKRYO14609 159 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 DHHO43323 396 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 MGRN1O60291 552 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 QDPRP09417 244 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 ANXA8P13928 327 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 CDH2P19022 906 aaPredicted RBP11.61□□□□□ -0.55
CKAP2-202ENST00000378034 NR1H2P55055 460 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 TBRG1Q3YBR2 411 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 NRN1LQ496H8 165 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 C10orf128Q5T292 105 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 TMEM179BQ7Z7N9 219 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 WDR31Q8NA23 367 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 OR52L1Q8NGH7 329 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 OR5K1Q8NHB7 308 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 MCHR2Q969V1 340 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF837Q96EG3 531 aaPredicted RBP11.61□□□□□ -0.55
CKAP2-202ENST00000378034 RASSF1Q9NS23 344 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 ADAM18Q9Y3Q7 739 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 DEFB108AA8MXU0 73 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF84P51523 738 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 UBE2NP61088 152 aaKnown RBP11.6□□□□□ -0.55
CKAP2-202ENST00000378034 ADCK1Q86TW2 530 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 HIPK1Q86Z02 1210 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 SYT14Q8NB59 555 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 DNAJC9Q8WXX5 260 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 GTPBP3Q969Y2 492 aaKnown RBP11.6□□□□□ -0.55
CKAP2-202ENST00000378034 NMD3Q96D46 503 aaKnown RBP11.6□□□□□ -0.55
CKAP2-202ENST00000378034 SAMD8Q96LT4 415 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 Q96M85 177 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 FOXB1Q99853 325 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 IFT27Q9BW83 186 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 DENND2DQ9H6A0 471 aaPredicted RBP11.6□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF556Q9HAH1 456 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 IER3IP1Q9Y5U9 82 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 ALPK2Q86TB3 2170 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 UNC79Q9P2D8 2635 aa11.6□□□□□ -0.55
CKAP2-202ENST00000378034 ARHGEF9O43307 516 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 HRGP04196 525 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 PRF1P14222 555 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 CD47Q08722 323 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 KRR1Q13601 381 aaKnown RBP11.59□□□□□ -0.55
CKAP2-202ENST00000378034 HIKESHIQ53FT3 197 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 KLHL17Q6TDP4 642 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 SEZ6L2Q6UXD5 910 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF813Q6ZN06 617 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 OR52N5Q8NH56 324 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 ERMAPQ96PL5 475 aaPredicted RBP11.59□□□□□ -0.55
CKAP2-202ENST00000378034 SNX18Q96RF0 628 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 NELFAQ9H3P2 528 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 ESRP2Q9H6T0 727 aaKnown RBP11.59□□□□□ -0.55
CKAP2-202ENST00000378034 IL20RAQ9UHF4 553 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 BAIAP2Q9UQB8 552 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 CRYBG3Q68DQ2 2970 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 CELSR2Q9HCU4 2923 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 TEX13CA0A0J9YWL9 993 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 PRSS37A4D1T9 235 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 C3orf36Q3SXR2 165 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 MESTQ5EB52 335 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 FBXW10Q5XX13 1052 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 SLC25A47Q6Q0C1 308 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 DPPA2Q7Z7J5 298 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 TMEM200AQ86VY9 491 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 SVOPLQ8N434 492 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 FAM169BQ8N8A8 192 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 PYDC1Q8WXC3 89 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 LRTOMTQ8WZ04 291 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 CENPNQ96H22 339 aaPredicted RBP11.59□□□□□ -0.55
CKAP2-202ENST00000378034 NIPSNAP1Q9BPW8 284 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 EGLN3Q9H6Z9 239 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 TMEM38BQ9NVV0 291 aa11.59□□□□□ -0.55
CKAP2-202ENST00000378034 A0A096LPE4 126 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.58□□□□□ -0.56
CKAP2-202ENST00000378034 A0A1W2PPZ6 126 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 SLC22A23A1A5C7 686 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 PPP1R3DO95685 299 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 NPR2P20594 1047 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 NOS3P29474 1203 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 MYBPC1Q00872 1141 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 NCMAPQ5T1S8 102 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 NANOS1Q8WY41 292 aaKnown RBP11.58□□□□□ -0.56
CKAP2-202ENST00000378034 RASD2Q96D21 266 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 PIK3IP1Q96FE7 263 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 CLEC4MQ9H2X3 399 aaPredicted RBP11.58□□□□□ -0.56
CKAP2-202ENST00000378034 VSX1Q9NZR4 365 aaPredicted RBP11.58□□□□□ -0.56
CKAP2-202ENST00000378034 CENPEQ02224 2701 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 G3V2T6 193 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 BHLHE40O14503 412 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 SIAH2O43255 324 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 FARS2O95363 451 aaKnown RBP11.58□□□□□ -0.56
CKAP2-202ENST00000378034 OR8G3PP0DMU2 310 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 PTAFRP25105 342 aa11.58□□□□□ -0.56
CKAP2-202ENST00000378034 LOXP28300 417 aaPredicted RBP11.58□□□□□ -0.56
CKAP2-202ENST00000378034 MRPS34P82930 218 aaKnown RBP11.58□□□□□ -0.56
CKAP2-202ENST00000378034 ALKBH2Q6NS38 261 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms