RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 NDUFB7P17568 137 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 IL4RP24394 825 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 GIPRP48546 466 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 EPHA5P54756 1037 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 KCNJ8Q15842 424 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 FAM185AQ8N0U4 392 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 FZD9O00144 591 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 GPRIN2O60269 458 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 CXCL12P48061 93 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 MRPS28Q9Y2Q9 187 aaKnown RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 PKD1L3Q7Z443 1732 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 TAGLNQ01995 201 aaKnown RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 TBCEQ15813 527 aaPredicted RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 PHLDA2Q53GA4 152 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 RTP2Q5QGT7 225 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 DNAJC5GQ8N7S2 189 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 C20orf85Q9H1P6 137 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF93P35789 620 aaPredicted RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 RPE65Q16518 533 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 C9orf152Q5JTZ5 239 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 SUMF1Q8NBK3 374 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 AGBL5Q8NDL9 886 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 TMEM104Q8NE00 496 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 ATF6BQ99941 703 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 TIMM29Q9BSF4 260 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 CLCF1Q9UBD9 225 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 OSGIN2Q9Y236 505 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 OR2T7P0C7T2 308 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 RPL7P18124 248 aaKnown RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 Q1RN00 199 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 SLC39A5Q6ZMH5 540 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF574Q6ZN55 896 aaPredicted RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 VRK2Q86Y07 508 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 OR5D18Q8NGL1 313 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 GSTO2Q9H4Y5 243 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 GREB1Q4ZG55 1949 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 TMEM72A0PK05 275 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 GABRB3P28472 473 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 RAD52P43351 418 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF91Q05481 1191 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 Q6ZTK2 550 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 PIGQQ9BRB3 760 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 EMC7Q9NPA0 242 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 WDR88Q6ZMY6 472 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 CYS1Q717R9 158 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 AAED1Q7RTV5 226 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 LSMEM2Q8N112 164 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 TMEM106AQ96A25 262 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 ZC3HAV1LQ96H79 300 aaKnown RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 OR52A1Q9UKL2 312 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 CA3P07451 260 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 SUMO1P63165 101 aaKnown RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 ILKQ13418 452 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 EDDM3AQ14507 147 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 TAZQ16635 292 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 OR6C1Q96RD1 312 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 EIF1BO60739 113 aaKnown RBP11.55□□□□□ -0.56
VPS13A-204ENST00000376634 RAB33AQ14088 237 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 VAPAQ9P0L0 249 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 OSGIN1Q9UJX0 560 aa11.55□□□□□ -0.56
VPS13A-204ENST00000376634 GPR75O95800 540 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 PITX1P78337 314 aaPredicted RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 C19orf47Q8N9M1 422 aaKnown RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 LRIT1Q9P2V4 623 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 FAM96BQ9Y3D0 163 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 RAB7AP51149 207 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 PLAC9Q5JTB6 97 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 MFSD9Q8NBP5 474 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 SELEP16581 610 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 AOAHP28039 575 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 HOXC13P31276 330 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 RTL10Q7L3V2 364 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 MRPL10Q7Z7H8 261 aaKnown RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 CBARPQ8N350 705 aaPredicted RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 FRMD1Q8N878 549 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF778Q96MU6 729 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 BARHL1Q9BZE3 327 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 GABRQQ9UN88 632 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 RRP8O43159 456 aaKnown RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 Q6ZRG5 221 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 HRASLS5Q96KN8 279 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 SHARPINQ9H0F6 387 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 HCFC1R1Q9NWW0 138 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF586Q9NXT0 402 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 KCPQ6ZWJ8 1503 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 PTGER1P34995 402 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 HSD11B1LQ7Z5J1 315 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 ZC3H3Q8IXZ2 948 aaKnown RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 COL2A1P02458 1487 aaPredicted RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 CIDEAO60543 219 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 TMEM178AQ8NBL3 297 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF597Q96LX8 424 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 PKDREJQ9NTG1 2253 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 TCAPO15273 167 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 SBK2P0C263 348 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 CTSAP10619 480 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 TACR1P25103 407 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 C21orf33P30042 268 aaPredicted RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 OR1D4P47884 311 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms