RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 TMEM176BQ3YBM2 270 aaPredicted RBP16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 TP53P04637 393 aaPredicted RBP16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 ZNF43P17038 809 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 BIDP55957 195 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 ARPC4P59998 168 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 ELP2Q6IA86 826 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 MDGA2Q7Z553 956 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 EID2Q8N6I1 236 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 SLCO1C1Q9NYB5 712 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 PCP4L1A6NKN8 68 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 SCRG1O75711 98 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 RAD52P43351 418 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 COL28A1Q2UY09 1125 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 C14orf28Q4W4Y0 310 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 DCXRQ7Z4W1 244 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 BEST3Q8N1M1 668 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 OR10AC1Q8NH08 325 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 ADAMTS18Q8TE60 1221 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 RSPO3Q9BXY4 272 aaPredicted RBP16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 ACTR6Q9GZN1 396 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 NPFFR2Q9Y5X5 522 aa16.09■□□□□ 0.17
TRAF3IP1-201ENST00000373327 C9J4A7 227 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 WNT1P04628 370 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 CD27P26842 260 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 OTX2P32243 289 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 CXADRP78310 365 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 COMMD7Q86VX2 200 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 LRRC18Q8N456 261 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 CYSLTR2Q9NS75 346 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 COPZ2Q9P299 210 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 TRAPPC4Q9Y296 219 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 TTC28Q96AY4 2481 aa16.08■□□□□ 0.17
TRAF3IP1-201ENST00000373327 A0A087WUJ7 227 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 IFITM5A6NNB3 132 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 TPD52L2O43399 206 aaKnown RBP16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 HTR3BO95264 441 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 NPSR1Q6W5P4 371 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 CHAC2Q8WUX2 184 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 CCDC107Q8WV48 283 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 KIAA1143Q96AT1 154 aaPredicted RBP16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SIGLEC11Q96RL6 698 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 CAMK2AQ9UQM7 478 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SCO1O75880 301 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 MPZL1O95297 269 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SLC6A8P48029 635 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 GZMKP49863 264 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 FMODQ06828 376 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 PRTGQ2VWP7 1150 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 C1orf140Q5VVS0 124 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 BATF2Q8N1L9 274 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SPERTQ8NA61 448 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 APOBEC4Q8WW27 367 aaKnown RBP16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 TAAR8Q969N4 342 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 PGAM5Q96HS1 289 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SHDQ96IW2 340 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 MED18Q9BUE0 208 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 POTEKPQ9BYX7 375 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 PILRAQ9UKJ1 303 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 CXCL12P48061 93 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 AKR1D1P51857 326 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 OR51S1Q8NGJ8 323 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 STT3BQ8TCJ2 826 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 GPBAR1Q8TDU6 330 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 DKKL1Q9UK85 242 aa16.08■□□□□ 0.16
TRAF3IP1-201ENST00000373327 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 METTL11BQ5VVY1 283 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 MAMSTRQ6ZN01 415 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 RNASE11Q8TAA1 199 aaKnown RBP16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 WDFY2Q96P53 400 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 HHLA2Q9UM44 414 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 NBASA2RRP1 2371 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 NGFRP08138 427 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 POU3F3P20264 500 aaPredicted RBP16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SDHAP31040 664 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 UEVLDQ8IX04 471 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 OR2I1PQ8NGU4 316 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 FGGYQ96C11 551 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 CLEC1BQ9P126 229 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 KLHL13Q9P2N7 655 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 FOLR1P15328 257 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 CLDN20P56880 219 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SORDQ00796 357 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 C9orf135Q5VTT2 229 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SLC16A9Q7RTY1 509 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 DHRS1Q96LJ7 313 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 EMC7Q9NPA0 242 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 ISYNA1Q9NPH2 558 aa16.07■□□□□ 0.16
TRAF3IP1-201ENST00000373327 CCSO14618 274 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 OR2T1O43869 369 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 APOC3P02656 99 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SFTPBP07988 381 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 RBM34P42696 430 aaKnown RBP16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SRYQ05066 204 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 MANEAQ5SRI9 462 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 STAC2Q6ZMT1 411 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 GLB1L2Q8IW92 636 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 PTDSS2Q9BVG9 487 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 TAS2R4Q9NYW5 299 aa16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 PTRH2Q9Y3E5 179 aaKnown RBP16.06■□□□□ 0.16
TRAF3IP1-201ENST00000373327 TRAV36DV7A0A075B6V5 113 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms