RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ARHGEF9O43307 516 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 DHHO43323 396 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 QDPRP09417 244 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 ZNF23P17027 643 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 ARF1P84077 181 aaKnown RBP12.09□□□□□ -0.47
SSR4-202ENST00000370085 TLE4Q04727 773 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 LGALS3BPQ08380 585 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 KRR1Q13601 381 aaKnown RBP12.09□□□□□ -0.47
SSR4-202ENST00000370085 FHL1Q13642 323 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 TAB1Q15750 504 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 CD300LDQ6UXZ3 194 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 TMEM200AQ86VY9 491 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 JAZF1Q86VZ6 243 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 ZNF519Q8TB69 540 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 TEX47Q8TBZ9 253 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 PYDC1Q8WXC3 89 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 CENPNQ96H22 339 aaPredicted RBP12.09□□□□□ -0.47
SSR4-202ENST00000370085 SAMD8Q96LT4 415 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 ERMAPQ96PL5 475 aaPredicted RBP12.09□□□□□ -0.47
SSR4-202ENST00000370085 TSPAN32Q96QS1 320 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 GPA33Q99795 319 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 FOXB1Q99853 325 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 MRPL13Q9BYD1 178 aaKnown RBP12.09□□□□□ -0.47
SSR4-202ENST00000370085 KCNN2Q9H2S1 579 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 SLC17A5Q9NRA2 495 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 TBC1D23Q9NUY8 699 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 IL20Q9NYY1 176 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 ENOPH1Q9UHY7 261 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 EDARQ9UNE0 448 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 BAIAP2Q9UQB8 552 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 ADAM18Q9Y3Q7 739 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 IER3IP1Q9Y5U9 82 aa12.09□□□□□ -0.47
SSR4-202ENST00000370085 SETXQ7Z333 2677 aaKnown RBP12.08□□□□□ -0.48
SSR4-202ENST00000370085 H3BN98 237 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 ARPC3O15145 178 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 TXNDC12O95881 172 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 CAPZA2P47755 286 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 IST1P53990 364 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 HIST3H3Q16695 136 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 TBRG1Q3YBR2 411 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 NRN1LQ496H8 165 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 HIST2H2BCQ6DN03 193 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 DNM1P34Q6PK57 102 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 TMEM108Q6UXF1 575 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 THSD4Q6ZMP0 1018 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 ZNF813Q6ZN06 617 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 DPPA2Q7Z7J5 298 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 OR2T33Q8NG76 320 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 OR52N5Q8NH56 324 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 MCHR2Q969V1 340 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 Q96M85 177 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 OSBPL10Q9BXB5 764 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 DENND2DQ9H6A0 471 aaPredicted RBP12.08□□□□□ -0.48
SSR4-202ENST00000370085 IL20RAQ9UHF4 553 aa12.08□□□□□ -0.48
SSR4-202ENST00000370085 ABCA4P78363 2273 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 A0A096LPE4 126 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 ARPC4-TTLL3A0A0A6YYG9 625 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 TEX13CA0A0J9YWL9 993 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 A0A1W2PPZ6 126 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 PRSS37A4D1T9 235 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 PPP1R3DO95685 299 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 RENP00797 406 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 IFNGP01579 166 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 OR8G3PP0DMU2 310 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 NPR2P20594 1047 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 CRABP1P29762 137 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 FOXG1P55316 489 aaPredicted RBP12.07□□□□□ -0.48
SSR4-202ENST00000370085 MYBPC1Q00872 1141 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 HIKESHIQ53FT3 197 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 CLEC12AQ5QGZ9 265 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 PHYHD1Q5SRE7 291 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 C10orf128Q5T292 105 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 LRFN4Q6PJG9 635 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 ZNF627Q7L945 461 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 LINGO2Q7L985 606 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 FAM122BQ7Z309 247 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 LRTOMTQ8WZ04 291 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 HDAC2Q92769 488 aaKnown RBP12.07□□□□□ -0.48
SSR4-202ENST00000370085 BCL2L2Q92843 193 aaPredicted RBP12.07□□□□□ -0.48
SSR4-202ENST00000370085 EGLN3Q9H6Z9 239 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 FBXL3Q9UKT7 428 aa12.07□□□□□ -0.48
SSR4-202ENST00000370085 DCHS2Q6V1P9 2916 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 SOCS2O14508 198 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 CTAG2O75638 210 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 UBL3O95164 117 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 THBDP07204 575 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 ZNF26P17031 533 aaPredicted RBP12.06□□□□□ -0.48
SSR4-202ENST00000370085 ZNF133P52736 654 aaPredicted RBP12.06□□□□□ -0.48
SSR4-202ENST00000370085 FXYD6P3P58550 94 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 RUNX1T1Q06455 604 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 MESTQ5EB52 335 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 TMEM179BQ7Z7N9 219 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 AMIGO2Q86SJ2 522 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 DEPDC4Q8N2C3 294 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 RASD2Q96D21 266 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 PIK3IP1Q96FE7 263 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 RADILQ96JH8 1075 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 SNX18Q96RF0 628 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 NIPSNAP1Q9BPW8 284 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms