RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 RPS27P42677 84 aaKnown RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 RBM34P42696 430 aaKnown RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 PNLIPRP2P54317 469 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 INPP5JQ15735 1006 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 NKAPLQ5M9Q1 402 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 BPIFB2Q8N4F0 458 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 CLEC1AQ8NC01 280 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 OR51A4Q8NGJ6 313 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF285Q96NJ3 590 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 ALX4Q9H161 411 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 HCFC1R1Q9NWW0 138 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 FRRS1LQ9P0K9 344 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 EPHA6Q9UF33 1036 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 MIOXQ9UGB7 285 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF860A6NHJ4 632 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF208O43345 1280 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 SRPX2O60687 465 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 CXCL14O95715 111 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 WNT11O96014 354 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 CD8AP01732 235 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF888P0CJ79 500 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 SMIM6P0DI80 62 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 TPT1P13693 172 aaKnown RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 PGAM2P15259 253 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 AKR1C3P42330 323 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 C2orf76Q3KRA6 126 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 ATPAF1Q5TC12 328 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF417Q8TAU3 575 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 CCDC74AQ96AQ1 378 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 SLC25A21Q9BQT8 299 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 MKKSQ9NPJ1 570 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 UQCC1Q9NVA1 299 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 MANSC4A6NHS7 340 aaPredicted RBP13.09□□□□□ -0.31
PHTF1-204ENST00000369604 C4orf47A7E2U8 309 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 BLOC1S5-TXNDC5H3BN57 136 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 AVPR2P30518 371 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 PPT1P50897 306 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 ADAM8P78325 824 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 GGTLC2Q14390 218 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 EXOSC7Q15024 291 aaKnown RBP13.09□□□□□ -0.31
PHTF1-204ENST00000369604 NR0B2Q15466 257 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 RAB11BQ15907 218 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 DEFB134Q4QY38 66 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 CD99L2Q8TCZ2 262 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 RNF141Q8WVD5 230 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 DCUN1D4Q92564 292 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 FAM3DQ96BQ1 224 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 C14orf79Q96F83 325 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 BCL2L14Q9BZR8 327 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 OR2S2Q9NQN1 319 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 PRMT8Q9NR22 394 aaPredicted RBP13.09□□□□□ -0.31
PHTF1-204ENST00000369604 TTLL8A6PVC2 850 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 AGPAT2O15120 278 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 ALOX12BO75342 701 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 S100A8P05109 93 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 RD3LP0DJH9 198 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 CST5P28325 142 aaPredicted RBP13.09□□□□□ -0.31
PHTF1-204ENST00000369604 CCKBRP32239 447 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 EIF2S3LQ2VIR3 472 aaKnown RBP13.09□□□□□ -0.31
PHTF1-204ENST00000369604 JAZF1Q86VZ6 243 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 NPEPL1Q8NDH3 523 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 ZC3H10Q96K80 434 aaKnown RBP13.09□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF558Q96NG5 402 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 SELENOIQ9C0D9 397 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
PHTF1-204ENST00000369604 TRIOO75962 3097 aa13.09□□□□□ -0.31
PHTF1-204ENST00000369604 A0A0B4J2E0 115 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 A0A1B0GTQ1 180 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 A0A1B0GX12 115 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF736B4DX44 427 aaPredicted RBP13.08□□□□□ -0.31
PHTF1-204ENST00000369604 SULT2B1O00204 365 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 ICOSLGO75144 302 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 TMEM127O75204 238 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 FGF18O76093 207 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 C8AP07357 584 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 SLC25A4P12235 298 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 ADRB3P13945 408 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 ABOP16442 354 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 DEFB115Q30KQ5 88 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 OR4E2Q8NGC2 313 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 PHOSPHO1Q8TCT1 267 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 GPR148Q8TDV2 347 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 ELP5Q8TE02 316 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 NKD1Q969G9 470 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 KLHDC2Q9Y2U9 406 aa13.08□□□□□ -0.31
PHTF1-204ENST00000369604 CARHSP1Q9Y2V2 147 aaKnown RBP13.08□□□□□ -0.31
PHTF1-204ENST00000369604 GRXCR1A8MXD5 290 aa13.08□□□□□ -0.32
PHTF1-204ENST00000369604 TGM5O43548 720 aa13.08□□□□□ -0.32
PHTF1-204ENST00000369604 LDB3O75112 727 aa13.08□□□□□ -0.32
PHTF1-204ENST00000369604 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
PHTF1-204ENST00000369604 VWA2Q5GFL6 755 aa13.08□□□□□ -0.32
PHTF1-204ENST00000369604 ZNF704Q6ZNC4 412 aaPredicted RBP13.08□□□□□ -0.32
PHTF1-204ENST00000369604 ZAR1Q86SH2 424 aa13.08□□□□□ -0.32
PHTF1-204ENST00000369604 OR5AP2Q8NGF4 316 aa13.08□□□□□ -0.32
PHTF1-204ENST00000369604 MRM2Q9UI43 246 aaKnown RBP13.08□□□□□ -0.32
PHTF1-204ENST00000369604 LAMP5Q9UJQ1 280 aa13.08□□□□□ -0.32
PHTF1-204ENST00000369604 OR1A2Q9Y585 309 aa13.08□□□□□ -0.32
PHTF1-204ENST00000369604 WDR87Q6ZQQ6 2873 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms