RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ZNF485Q8NCK3 441 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SYT17Q9BSW7 474 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 GSX2Q9BZM3 304 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 Q9Y3F1 56 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SCN2AQ99250 2005 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 HSD17B6O14756 317 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SNRPBP14678 240 aaKnown RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 TNFRSF17Q02223 184 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 MBOAT2Q6ZWT7 520 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 THNSL2Q86YJ6 484 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 DVL3Q92997 716 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 MARCH4Q9P2E8 410 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 PADI1Q9ULC6 663 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 PIGLQ9Y2B2 252 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 KMT2EQ8IZD2 1858 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ABCD4O14678 606 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 PPP1CBP62140 327 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 FAM3DQ96BQ1 224 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 TVP23CQ96ET8 276 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 MRPL22Q9NWU5 206 aaKnown RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 KIAA1456Q9P272 454 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ATP1B1P05026 303 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 NME1P15531 152 aaKnown RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ADPRMQ3LIE5 342 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 VWA1Q6PCB0 445 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 NAXDQ8IW45 347 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SIAEQ9HAT2 523 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 DNMT3BQ9UBC3 853 aaKnown RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 RFPL4AA6NLU0 287 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 RFPL4AL1F8VTS6 287 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 MAN2B1O00754 1011 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 CPMP14384 443 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 NECAP1Q8NC96 275 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ST8SIA2Q92186 375 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 IL17FQ96PD4 163 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ADOQ96SZ5 270 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 LGALS4P56470 323 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 OR5I1Q13606 314 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ACOT6Q3I5F7 207 aaPredicted RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 OR51A4Q8NGJ6 313 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 SLC7A6Q92536 515 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 UTP4Q969X6 686 aaKnown RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 SLC45A1Q9Y2W3 748 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 A0A1W2PQU0 124 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 GPR171O14626 319 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF264O43296 627 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 SIM1P81133 766 aaPredicted RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 RABEPKQ7Z6M1 372 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF541Q9H0D2 1346 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 OR1D4P47884 311 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 FXNQ16595 210 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 SCN4AP35499 1836 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 FRS3O43559 492 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ATXN1LP0C7T5 689 aaKnown RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 HNF1AP20823 631 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 MS4A2Q01362 244 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ISCA2Q86U28 154 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 AMBRA1Q9C0C7 1298 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ACTR3CQ9C0K3 210 aaPredicted RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 CARD18P57730 90 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 CEBPEQ15744 281 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 GPR119Q8TDV5 335 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 SSSCA1O60232 199 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 SLC35A1P78382 337 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 HAGHQ16775 308 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 UQCC3Q6UW78 93 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 MOCOSQ96EN8 888 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 PARD6AQ9NPB6 346 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 RALYQ9UKM9 306 aaKnown RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 GPR55Q9Y2T6 319 aaPredicted RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ACTL7AQ9Y615 435 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 PIRO00625 290 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 CTXN2P0C2S0 81 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 CLEC4DQ8WXI8 215 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 TAS2R5Q9NYW4 299 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 CSF3P09919 207 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 CD1EP15812 388 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 GHSRQ92847 366 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 OR2J3O76001 311 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 PTAFRP25105 342 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 UBE2IP63279 158 aaKnown RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 TEX261Q6UWH6 196 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 GDPD3Q7L5L3 318 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ACPTQ9BZG2 426 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 TOLLIPQ9H0E2 274 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 U3KQ87 197 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 GLAP06280 429 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 APEX1P27695 318 aaKnown RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 PPP2CAP67775 309 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 SLC14A2Q15849 920 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 SLC22A12Q96S37 553 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 C11orf54Q9H0W9 315 aaPredicted RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 GSTO2Q9H4Y5 243 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ASH2LQ9UBL3 628 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 PISDQ9UG56 409 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 OR7C2O60412 319 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 TMPRSS11FQ6ZWK6 438 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 TIPARPQ7Z3E1 657 aaKnown RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 KDM3BQ7LBC6 1761 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms