RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 C10orf82Q8WW14 230 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 TMEM54Q969K7 222 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 SLC25A44Q96H78 314 aaPredicted RBP10.72□□□□□ -0.69
SGCA-202ENST00000344627 DOK1Q99704 481 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 SH3GL3Q99963 347 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 C19orf24Q9BVV8 132 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 SLC19A3Q9BZV2 496 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 MS4A5Q9H3V2 200 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 CHODLQ9H9P2 273 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 SAR1AQ9NR31 198 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 RIMS3Q9UJD0 308 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 FZR1Q9UM11 496 aa10.72□□□□□ -0.69
SGCA-202ENST00000344627 SVEP1Q4LDE5 3571 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 TMEM129A0AVI4 362 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 TCF21O43680 179 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 FARS2O95363 451 aaKnown RBP10.71□□□□□ -0.69
SGCA-202ENST00000344627 NPPAP01160 153 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 IGHG1P01857 330 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 F13BP05160 661 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 QDPRP09417 244 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 OR8G3PP0DMU2 310 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 DAOP14920 347 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 ZNF14P17017 642 aaPredicted RBP10.71□□□□□ -0.69
SGCA-202ENST00000344627 FUT1P19526 365 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 NR4A1P22736 598 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 MYBPC1Q00872 1141 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 PIN1Q13526 163 aaPredicted RBP10.71□□□□□ -0.69
SGCA-202ENST00000344627 HSP90B2PQ58FF3 399 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 TMEM53Q6P2H8 277 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 NKAIN4Q8IVV8 208 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 SKA3Q8IX90 412 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 SLC22A24Q8N4F4 322 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 LINC01356Q8N9X3 169 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 SYT14Q8NB59 555 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 TMEM255BQ8WV15 326 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 ZFAND2BQ8WV99 257 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 SGTBQ96EQ0 304 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 C1orf159Q96HA4 380 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 SYT3Q9BQG1 590 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 PRSS27Q9BQR3 290 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 BPESC1Q9GZL8 116 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 PCDHAC1Q9H158 963 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 TPK1Q9H3S4 243 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 DUSP13Q9UII6 198 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 CAPN7Q9Y6W3 813 aa10.71□□□□□ -0.69
SGCA-202ENST00000344627 ANK2Q01484 3957 aa10.71□□□□□ -0.7
SGCA-202ENST00000344627 IGHV4-61A0A0C4DH41 118 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 HAX1O00165 279 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 FXYD1O00168 92 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 DHHO43323 396 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 OR7A10O76100 309 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 OR5F1O95221 314 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 MT-ND1P03886 318 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 ASAH2BP0C7U1 165 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 TCN1P20061 433 aaPredicted RBP10.7□□□□□ -0.7
SGCA-202ENST00000344627 IFNA8P32881 189 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 AQP2P41181 271 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 ZNF84P51523 738 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 CRYBA2P53672 197 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 UGT2B15P54855 530 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 RPS23P62266 143 aaKnown RBP10.7□□□□□ -0.7
SGCA-202ENST00000344627 GUCY1A3Q02108 690 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 RPL18Q07020 188 aaKnown RBP10.7□□□□□ -0.7
SGCA-202ENST00000344627 CYBRD1Q53TN4 286 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 COQ5Q5HYK3 327 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 LRFN4Q6PJG9 635 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 ZNF627Q7L945 461 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 SLC16A14Q7RTX9 510 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 POU5F2Q8N7G0 328 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 OR2T12Q8NG77 320 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 FGFBP3Q8TAT2 258 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 UBASH3BQ8TF42 649 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 TMEM239Q8WW34 195 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 RCN3Q96D15 328 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 ZNF583Q96ND8 569 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 ZNF347Q96SE7 839 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 MRPL37Q9BZE1 423 aaKnown RBP10.7□□□□□ -0.7
SGCA-202ENST00000344627 OR51B6Q9H340 312 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 MEPEQ9NQ76 525 aaPredicted RBP10.7□□□□□ -0.7
SGCA-202ENST00000344627 INIPQ9NRY2 104 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 ARMCX1Q9P291 453 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 REV1Q9UBZ9 1251 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 MED31Q9Y3C7 131 aa10.7□□□□□ -0.7
SGCA-202ENST00000344627 A0A1W2PPW3 197 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 ELOVL7A1L3X0 281 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 FAM220BPB1ANY3 271 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 M0R233 179 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 GSTA4O15217 222 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 SYNGR3O43761 229 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 SERPINA5P05154 406 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 PGA4P0DJD7 388 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 PGA3P0DJD8 388 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 ZNF35P13682 527 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 ACADSP16219 412 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 KDELR2P33947 212 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 GLRXP35754 106 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 RBM34P42696 430 aaKnown RBP10.69□□□□□ -0.7
SGCA-202ENST00000344627 ALDH3B1P43353 468 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 YAP1P46937 504 aaKnown RBP10.69□□□□□ -0.7
SGCA-202ENST00000344627 DAP3P51398 398 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms