RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SCARB2Q14108 478 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 OR1Q1Q15612 314 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 DLEU7Q6UYE1 221 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 PIWIL3Q7Z3Z3 882 aaKnown RBP13.38□□□□□ -0.27
LINC01116-202ENST00000339037 ZNF584Q8IVC4 421 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 TEX29Q8N6K0 151 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 ZMYND19Q96E35 227 aaPredicted RBP13.38□□□□□ -0.27
LINC01116-202ENST00000339037 WFDC6Q9BQY6 131 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 CPPED1Q9BRF8 314 aaPredicted RBP13.38□□□□□ -0.27
LINC01116-202ENST00000339037 TMEM43Q9BTV4 400 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 TMEM38AQ9H6F2 299 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
LINC01116-202ENST00000339037 ENTPD5O75356 428 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 MT-ATP6P00846 226 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 PATE4P0C8F1 98 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 COMPP49747 757 aaPredicted RBP13.37□□□□□ -0.27
LINC01116-202ENST00000339037 CDH12P55289 794 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 BIDP55957 195 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 SELENOVP59797 346 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 HILS1P60008 231 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 MYBPC1Q00872 1141 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 ALKBH6Q3KRA9 238 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 RGS7BPQ6MZT1 257 aaPredicted RBP13.37□□□□□ -0.27
LINC01116-202ENST00000339037 TMEM154Q6P9G4 183 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 RANBP3LQ86VV4 465 aaPredicted RBP13.37□□□□□ -0.27
LINC01116-202ENST00000339037 SKA3Q8IX90 412 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 SLC22A24Q8N4F4 322 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 C3orf56Q8N813 242 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 BHLHE22Q8NFJ8 381 aaPredicted RBP13.37□□□□□ -0.27
LINC01116-202ENST00000339037 GCDHQ92947 438 aaPredicted RBP13.37□□□□□ -0.27
LINC01116-202ENST00000339037 ZNF607Q96SK3 696 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 GPR160Q9UJ42 338 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 PCDHB10Q9UN67 800 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 CORO2BQ9UQ03 480 aa13.37□□□□□ -0.27
LINC01116-202ENST00000339037 EVPLLA8MZ36 301 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 HMGB1P1B2RPK0 211 aaPredicted RBP13.36□□□□□ -0.27
LINC01116-202ENST00000339037 C11orf98E9PRG8 122 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 TPST2O60704 377 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 SERPINB7O75635 380 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 OR6A2O95222 327 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 FAM157BP0CG42 384 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 ADORA3P0DMS8 318 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 OR8G3PP0DMU2 310 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 ANPEPP15144 967 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 EPHA1P21709 976 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 SLC6A2P23975 617 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 MAGEB1P43366 347 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 KLF3P57682 345 aaPredicted RBP13.36□□□□□ -0.27
LINC01116-202ENST00000339037 PSMA6P60900 246 aaKnown RBP13.36□□□□□ -0.27
LINC01116-202ENST00000339037 CCL8P80075 99 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 SELPLGQ14242 412 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 RUNDC3AQ59EK9 446 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 USP43Q70EL4 1123 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 DHDDSQ86SQ9 333 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 PTOV1Q86YD1 416 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 ARMC8Q8IUR7 673 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 LINC00528Q8N1L1 170 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 SLC30A7Q8NEW0 376 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 OR5J2Q8NH18 312 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 FGFBP3Q8TAT2 258 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 FAM216AQ8WUB2 273 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 SNX33Q8WV41 574 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 MAGEB18Q96M61 343 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 HINT3Q9NQE9 182 aaKnown RBP13.36□□□□□ -0.27
LINC01116-202ENST00000339037 GLTPQ9NZD2 209 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 TAAR3PQ9P1P4 343 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 TRRAPQ9Y4A5 3859 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 WNK2Q9Y3S1 2297 aa13.36□□□□□ -0.27
LINC01116-202ENST00000339037 DYSFO75923 2080 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 LOC105371242A0A075B767 164 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 SLC22A23A1A5C7 686 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 C17orf100A8MU93 164 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 TRIM77I1YAP6 450 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 WIPF1O43516 503 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 CDC14BO60729 498 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 FARS2O95363 451 aaKnown RBP13.35□□□□□ -0.27
LINC01116-202ENST00000339037 CLPTM1O96005 669 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 MTPNP58546 118 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 RBBP4Q09028 425 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 PCGF3Q3KNV8 242 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 MMEL1Q495T6 779 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 ACSM5Q6NUN0 579 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 WDR88Q6ZMY6 472 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 C1orf229Q6ZS94 237 aaPredicted RBP13.35□□□□□ -0.27
LINC01116-202ENST00000339037 PEG10Q86TG7 708 aaKnown RBP13.35□□□□□ -0.27
LINC01116-202ENST00000339037 PAQR4Q8N4S7 273 aaPredicted RBP13.35□□□□□ -0.27
LINC01116-202ENST00000339037 HIPK4Q8NE63 616 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 OR6X1Q8NH79 312 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 SYNPRQ8TBG9 265 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 STON2Q8WXE9 905 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 TMEM54Q969K7 222 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 ZNF566Q969W8 418 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 JMJD8Q96S16 334 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 SH3GL3Q99963 347 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 RABEP2Q9H5N1 569 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 ZNF665Q9H7R5 613 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 EVA1AQ9H8M9 152 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 NPHS2Q9NP85 383 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 TMEM38BQ9NVV0 291 aa13.35□□□□□ -0.27
LINC01116-202ENST00000339037 EGFL7Q9UHF1 273 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms