RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 IGFBP2P18065 325 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 SP5Q6BEB4 398 aaPredicted RBP13.53□□□□□ -0.24
SEC13-201ENST00000337354 SLC27A4Q6P1M0 643 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 LRFN4Q6PJG9 635 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 BHLHA15Q7RTS1 189 aaPredicted RBP13.53□□□□□ -0.24
SEC13-201ENST00000337354 WDFY1Q8IWB7 410 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 C17orf78Q8N4C9 275 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 SYT14Q8NB59 555 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 ACBD4Q8NC06 268 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 MCHR2Q969V1 340 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 EME1Q96AY2 570 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 ALKBH3Q96Q83 286 aaPredicted RBP13.53□□□□□ -0.24
SEC13-201ENST00000337354 CIB1Q99828 191 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 PLA2G12AQ9BZM1 189 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 SLC22A23A1A5C7 686 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 PRSS37A4D1T9 235 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 TUBAL3A6NHL2 446 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 ZNF99A8MXY4 864 aaPredicted RBP13.52□□□□□ -0.25
SEC13-201ENST00000337354 DHHO43323 396 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 LYZL6O75951 148 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 ITGA5P08648 1049 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 HOXB1P14653 301 aaPredicted RBP13.52□□□□□ -0.25
SEC13-201ENST00000337354 PAX7P23759 505 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 IGFBP5P24593 272 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 POU1F1P28069 291 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 GRNP28799 593 aaKnown RBP13.52□□□□□ -0.25
SEC13-201ENST00000337354 ALDH3A2P51648 485 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 CRISP1P54107 249 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 MYBPC1Q00872 1141 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 LGALS3BPQ08380 585 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 CD47Q08722 323 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 KRR1Q13601 381 aaKnown RBP13.52□□□□□ -0.25
SEC13-201ENST00000337354 DAG1Q14118 895 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 GABRA6Q16445 453 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 CEACAM16Q2WEN9 425 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 NRN1LQ496H8 165 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 MESTQ5EB52 335 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 PHYHD1Q5SRE7 291 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 ANKRD34AQ69YU3 496 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 ZBTB49Q6ZSB9 765 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 ZNF627Q7L945 461 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 LINGO2Q7L985 606 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 DMRTC2Q8IXT2 367 aaPredicted RBP13.52□□□□□ -0.25
SEC13-201ENST00000337354 OR8D4Q8NGM9 314 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 HSD17B8Q92506 261 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 NMD3Q96D46 503 aaKnown RBP13.52□□□□□ -0.25
SEC13-201ENST00000337354 DOCK7Q96N67 2140 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 DACH2Q96NX9 599 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 ACTR6Q9GZN1 396 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 C8orf4Q9NR00 106 aa13.52□□□□□ -0.25
SEC13-201ENST00000337354 VSX1Q9NZR4 365 aaPredicted RBP13.52□□□□□ -0.25
SEC13-201ENST00000337354 C19orf84I3L1E1 186 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 SOCS2O14508 198 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 HMGN1P05114 100 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 ALPLP05186 524 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 IGFBP1P08833 259 aaPredicted RBP13.51□□□□□ -0.25
SEC13-201ENST00000337354 HIST1H1CP16403 213 aaKnown RBP13.51□□□□□ -0.25
SEC13-201ENST00000337354 CDH2P19022 906 aaPredicted RBP13.51□□□□□ -0.25
SEC13-201ENST00000337354 KIR2DL3P43628 341 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 ZNF84P51523 738 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 CDK5Q00535 292 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 GINS1Q14691 196 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 TIMM23BQ5SRD1 257 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 C10orf128Q5T292 105 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 ANKRD16Q6P6B7 361 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 JAZF1Q86VZ6 243 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 CCDC36Q8IYA8 594 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 CBR4Q8N4T8 237 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 RASD2Q96D21 266 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 OBP2BQ9NPH6 170 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 TMEFF2Q9UIK5 374 aaPredicted RBP13.51□□□□□ -0.25
SEC13-201ENST00000337354 KLHL21Q9UJP4 597 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 ORC6Q9Y5N6 252 aa13.51□□□□□ -0.25
SEC13-201ENST00000337354 MED12LQ86YW9 2145 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 OR5H1A6NKK0 313 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 EI24O14681 340 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 RAD51DO75771 328 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 RENP00797 406 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 IFNGP01579 166 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 CRABP1P29762 137 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 GRK5P34947 590 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 CDKN2AP42771 156 aaKnown RBP13.5□□□□□ -0.25
SEC13-201ENST00000337354 GUCA1AP43080 201 aaPredicted RBP13.5□□□□□ -0.25
SEC13-201ENST00000337354 RAD23AP54725 363 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 FOXG1P55316 489 aaPredicted RBP13.5□□□□□ -0.25
SEC13-201ENST00000337354 ARF1P84077 181 aaKnown RBP13.5□□□□□ -0.25
SEC13-201ENST00000337354 PTGES3Q15185 160 aaKnown RBP13.5□□□□□ -0.25
SEC13-201ENST00000337354 PGGHGQ32M88 737 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 ZNF362Q5T0B9 420 aaPredicted RBP13.5□□□□□ -0.25
SEC13-201ENST00000337354 SLC35F1Q5T1Q4 408 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 ZNF787Q6DD87 383 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 SLC25A47Q6Q0C1 308 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 OR52E2Q8NGJ4 325 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 OR1K1Q8NGR3 316 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 OR4Q3Q8NH05 313 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 OR4K13Q8NH42 304 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 S100PBPQ96BU1 408 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 MUCL1Q96DR8 90 aa13.5□□□□□ -0.25
SEC13-201ENST00000337354 ZNF837Q96EG3 531 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms