RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MCRIP1C9JLW8 97 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 NUPL2O15504 423 aaKnown RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ABOP16442 354 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 BTN1A1Q13410 526 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 AGBL5Q8NDL9 886 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 COA3Q9Y2R0 106 aaPredicted RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 MED16Q9Y2X0 877 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 EIF1BO60739 113 aaKnown RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 FBXO24O75426 580 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 DPP4P27487 766 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 CD1CP29017 333 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 BSGP35613 385 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 GABRA2P47869 451 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 MFAP5Q13361 173 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ANKRD34AQ69YU3 496 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ZNF620Q6ZNG0 422 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 CA13Q8N1Q1 262 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 SEC22CQ9BRL7 303 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 OR52A5Q9H2C5 316 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 OR6C76A6NM76 312 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 TMPRSS11DO60235 418 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 ALOX12BO75342 701 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 TUSC2O75896 110 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 CBX7O95931 251 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 ZNF133P52736 654 aaPredicted RBP10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 HMGN3Q15651 99 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 FAHD1Q6P587 224 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 ANKRD33Q7Z3H0 272 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 MDGA2Q7Z553 956 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 OR10K1Q8NGX5 313 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 FRZBQ92765 325 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 SLC35B4Q969S0 331 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 UTP23Q9BRU9 249 aaKnown RBP10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 SLC23A2Q9UGH3 650 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 PIGLQ9Y2B2 252 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 STRCQ7RTU9 1775 aa10.02□□□□□ -0.8
SNRNP200-201ENST00000323853 C17orf112F2Z3M2 114 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 KCNK2O95069 426 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 TRAPPC2P0DI81 140 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 TRAPPC2BP0DI82 140 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 GLYR1Q49A26 553 aaPredicted RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 ACSM5Q6NUN0 579 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 CADM3Q8N126 398 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 OR51D1Q8NGF3 324 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 ISYNA1Q9NPH2 558 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 PLSCR5A0PG75 271 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 HSPB6O14558 160 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 YKT6O15498 198 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 HSD17B7P56937 341 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 SOWAHCQ53LP3 525 aaPredicted RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 H1FNTQ75WM6 255 aaPredicted RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 OR5D18Q8NGL1 313 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 ZNF223Q9UK11 482 aaPredicted RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 ADAMTS7Q9UKP4 1686 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 A0A1W2PPV4 95 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 LILRB5O75023 590 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 ZNF780AO75290 641 aaPredicted RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 PRKACAP17612 351 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 ANXA7P20073 488 aaKnown RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 APOBEC1P41238 236 aaKnown RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 CAMK2BQ13554 666 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 LPCAT3Q6P1A2 487 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 GLIPR1L1Q6UWM5 242 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 GRINAQ7Z429 371 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 SYT9Q86SS6 491 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 HLA-CQ95604 372 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 IKZF5Q9H5V7 419 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 LTB4R2Q9NPC1 389 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 CHST2Q9Y4C5 530 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 KRBOX1C9JBD0 128 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 E9PI62 339 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 DDAH2O95865 285 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 CTSLP07711 333 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 NID1P14543 1247 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 ACHEP22303 614 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 CD27P26842 260 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 IL2RGP31785 369 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 FCRL6Q6DN72 434 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 PAPD4Q6PIY7 484 aaKnown RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 PAQR6Q6TCH4 344 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 PTOV1Q86YD1 416 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 SGK3Q96BR1 496 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 MRPL38Q96DV4 380 aaKnown RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 ZNF845Q96IR2 970 aaPredicted RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 PKMYT1Q99640 499 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 FGF22Q9HCT0 170 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 FAM212BQ9NTI7 297 aaPredicted RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 TAS2R4Q9NYW5 299 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 FBXO7Q9Y3I1 522 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 SLC34A2O95436 690 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 TGM6O95932 706 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 POU3F3P20264 500 aaPredicted RBP10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 S100A11P31949 105 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 NAXDQ8IW45 347 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 DYNC2LI1Q8TCX1 351 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 TMEM43Q9BTV4 400 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 WWTR1Q9GZV5 400 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms