RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 C20orf141Q9NUB4 165 aa16.84■□□□□ 0.29
LIME1-201ENST00000309546 TMEM38BQ9NVV0 291 aa16.84■□□□□ 0.29
LIME1-201ENST00000309546 RIMS3Q9UJD0 308 aa16.84■□□□□ 0.29
LIME1-201ENST00000309546 CDC42EP3Q9UKI2 254 aa16.84■□□□□ 0.29
LIME1-201ENST00000309546 FBXL3Q9UKT7 428 aa16.84■□□□□ 0.29
LIME1-201ENST00000309546 FARS2O95363 451 aaKnown RBP16.83■□□□□ 0.28
LIME1-201ENST00000309546 QDPRP09417 244 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 OR8G3PP0DMU2 310 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 ZNF35P13682 527 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 FUT1P19526 365 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 RBM34P42696 430 aaKnown RBP16.83■□□□□ 0.28
LIME1-201ENST00000309546 MYBPC1Q00872 1141 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 GUCY1A3Q02108 690 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 MSMPQ1L6U9 139 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 CYBRD1Q53TN4 286 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 LRFN4Q6PJG9 635 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 POU5F2Q8N7G0 328 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 ZNF540Q8NDQ6 660 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 NOXO1Q8NFA2 376 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 OR2T12Q8NG77 320 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 RCN3Q96D15 328 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 ZNF347Q96SE7 839 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 BEX2Q9BXY8 128 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 POLR2J2Q9GZM3 115 aaKnown RBP16.83■□□□□ 0.28
LIME1-201ENST00000309546 POLR2J3Q9H1A7 115 aaKnown RBP16.83■□□□□ 0.28
LIME1-201ENST00000309546 RNF121Q9H920 327 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 ARMCX1Q9P291 453 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 FZR1Q9UM11 496 aa16.83■□□□□ 0.28
LIME1-201ENST00000309546 LOC100289279A0A1B0GTE1 492 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 M0R233 179 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 LMX1BO60663 402 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 ENTPD5O75356 428 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 STAMBPO95630 424 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 GLRXP35754 106 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 AQP2P41181 271 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 RUNX1T1Q06455 604 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 FAM166AQ6J272 317 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 ZNF584Q8IVC4 421 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 ARIH2OSQ8N7S6 290 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 SYT14Q8NB59 555 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 OR4K5Q8NGD3 323 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 ASB10Q8WXI3 467 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 MCHR2Q969V1 340 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 SHARPINQ9H0F6 387 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 INIPQ9NRY2 104 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 ZNF446Q9NWS9 450 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 KCNS2Q9ULS6 477 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 MED31Q9Y3C7 131 aa16.82■□□□□ 0.28
LIME1-201ENST00000309546 CUBNO60494 3623 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 PIP5K1CO60331 668 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 IGFBP1P08833 259 aaPredicted RBP16.81■□□□□ 0.28
LIME1-201ENST00000309546 FAM157CP0CG43 387 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 ZNF23P17027 643 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 KDELR2P33947 212 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 ZNF84P51523 738 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 RPS23P62266 143 aaKnown RBP16.81■□□□□ 0.28
LIME1-201ENST00000309546 TMEM53Q6P2H8 277 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 SLC16A14Q7RTX9 510 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 MICU2Q8IYU8 434 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 MOSPD2Q8NHP6 518 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 UBASH3BQ8TF42 649 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 MSI2Q96DH6 328 aaKnown RBP16.81■□□□□ 0.28
LIME1-201ENST00000309546 OR51B6Q9H340 312 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 TMEM160Q9NX00 188 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 LPAR3Q9UBY5 353 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 SLC7A8Q9UHI5 535 aa16.81■□□□□ 0.28
LIME1-201ENST00000309546 A0A1W2PPW3 197 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 ELOVL7A1L3X0 281 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 LRP5LA4QPB2 252 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 SYNGR3O43761 229 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 TRMUO75648 421 aaKnown RBP16.8■□□□□ 0.28
LIME1-201ENST00000309546 SERPINA5P05154 406 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 FAM157BP0CG42 384 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 TCN1P20061 433 aaPredicted RBP16.8■□□□□ 0.28
LIME1-201ENST00000309546 IGFBP5P24593 272 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 ALDH3B1P43353 468 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 DAP3P51398 398 aaKnown RBP16.8■□□□□ 0.28
LIME1-201ENST00000309546 MAD2L1BPQ15013 274 aaPredicted RBP16.8■□□□□ 0.28
LIME1-201ENST00000309546 FXNQ16595 210 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 SLC36A2Q495M3 483 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 HSP90B2PQ58FF3 399 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 IL17RELQ6ZVW7 336 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 HDDC2Q7Z4H3 204 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 LRP11Q86VZ4 500 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 ZNF786Q8N393 782 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 SLC30A7Q8NEW0 376 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 PRRC1Q96M27 445 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 CDH20Q9HBT6 801 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 GMPR2Q9P2T1 348 aaKnown RBP16.8■□□□□ 0.28
LIME1-201ENST00000309546 REV1Q9UBZ9 1251 aa16.8■□□□□ 0.28
LIME1-201ENST00000309546 RNF212BA8MTL3 300 aa16.79■□□□□ 0.28
LIME1-201ENST00000309546 LYNX1G3V0Z9 82 aa16.79■□□□□ 0.28
LIME1-201ENST00000309546 LYNX1P0DP58 116 aa16.79■□□□□ 0.28
LIME1-201ENST00000309546 THRBP10828 461 aa16.79■□□□□ 0.28
LIME1-201ENST00000309546 CCL2P13500 99 aa16.79■□□□□ 0.28
LIME1-201ENST00000309546 ACADSP16219 412 aa16.79■□□□□ 0.28
LIME1-201ENST00000309546 GIFP27352 417 aa16.79■□□□□ 0.28
LIME1-201ENST00000309546 YAP1P46937 504 aaKnown RBP16.79■□□□□ 0.28
LIME1-201ENST00000309546 EVX1P49640 407 aa16.79■□□□□ 0.28
LIME1-201ENST00000309546 TOP3AQ13472 1001 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms