RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LINC01553A4QN01 128 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 TUSC2O75896 110 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 SIX6O95475 246 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 ABHD16AO95870 558 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 F10P00742 488 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 RNLSQ5VYX0 342 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 VHLLQ6RSH7 139 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 SLC37A2Q8TED4 501 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 CTRCQ99895 268 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 CGGBP1Q9UFW8 167 aaPredicted RBP12.81□□□□□ -0.36
PRKCB-201ENST00000303531 NTNG1Q9Y2I2 539 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 EIF1BO60739 113 aaKnown RBP12.81□□□□□ -0.36
PRKCB-201ENST00000303531 EIF1P41567 113 aaKnown RBP12.81□□□□□ -0.36
PRKCB-201ENST00000303531 HIST2H3PS2Q5TEC6 136 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 SLC35A4Q96G79 324 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 SIAEQ9HAT2 523 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 COA3Q9Y2R0 106 aaPredicted RBP12.81□□□□□ -0.36
PRKCB-201ENST00000303531 MAP1BP46821 2468 aaKnown RBP12.81□□□□□ -0.36
PRKCB-201ENST00000303531 SULT1B1O43704 296 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 IGLV3-25P01717 112 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 SBK2P0C263 348 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 NID1P14543 1247 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 ELK1P19419 428 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 KIAA1024LP59773 190 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 GLIPR1L1Q6UWM5 242 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 RAB39BQ96DA2 213 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 DYNLRB1Q9NP97 96 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 TBC1D29Q9UFV1 150 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 HOXC11O43248 304 aaPredicted RBP12.81□□□□□ -0.36
PRKCB-201ENST00000303531 ZNF749O43361 778 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 PMS2P2O95744 297 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 MT-ATP6P00846 226 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 IHHQ14623 411 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 ARHGAP11BQ3KRB8 267 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 ANKRD34AQ69YU3 496 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 OGFOD3Q6PK18 319 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 TMEM99Q8N816 258 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 TSSK2Q96PF2 358 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 LTB4R2Q9NPC1 389 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 NXT1Q9UKK6 140 aaKnown RBP12.81□□□□□ -0.36
PRKCB-201ENST00000303531 HS3ST3A1Q9Y663 406 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 MDFIC2A0A1B0GVS7 189 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 TIMM8AO60220 97 aaPredicted RBP12.81□□□□□ -0.36
PRKCB-201ENST00000303531 B4GALT3O60512 393 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 IGHEP01854 428 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 OR1D5P58170 312 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 ZNF74Q16587 644 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 MDGA2Q7Z553 956 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 SPNS2Q8IVW8 549 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 PXT1Q8NFP0 134 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 MUCL1Q96DR8 90 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 SDF2Q99470 211 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 TCEAL7Q9BRU2 100 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 GABARAPL3Q9BY60 117 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 SAMD10Q9BYL1 202 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 PCDHGA5Q9Y5G8 931 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 OR5K3A6NET4 321 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 MYOGP15173 224 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 ACSM5Q6NUN0 579 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 WDR5BQ86VZ2 330 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 CADM3Q8N126 398 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 KDM8Q8N371 416 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 ST7LQ8TDW4 575 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 NPY4RP50391 375 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 TPMTP51580 245 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 ADPRHP54922 357 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 KCNIP4Q6PIL6 250 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 PAQR6Q6TCH4 344 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 RNF141Q8WVD5 230 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 ATOH1Q92858 354 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-201ENST00000303531 GPR160Q9UJ42 338 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 PHF1O43189 567 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-201ENST00000303531 PYCR3Q53H96 274 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 ATPAF1Q5TC12 328 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-201ENST00000303531 DHRS4L2Q6PKH6 230 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 LYSMD1Q96S90 227 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 C19orf53Q9UNZ5 99 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-201ENST00000303531 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 TCRBV5S2A0A599 114 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 OIP5O43482 229 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 TMPRSS11DO60235 418 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 ANXA7P20073 488 aaKnown RBP12.8□□□□□ -0.36
PRKCB-201ENST00000303531 CD1CP29017 333 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 IRS1P35568 1242 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 DDOSTP39656 456 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 CLINT1Q14677 625 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 CREB3L2Q70SY1 520 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 PLPP5Q8NEB5 264 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 GNG12Q9UBI6 72 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 PRAMEF25A6NGN4 478 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 H0Y8X5 98 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 SLC2A10O95528 541 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 PTBP1P26599 531 aaKnown RBP eCLIP12.8□□□□□ -0.362e-7■■■■■ 42.7
PRKCB-201ENST00000303531 HCCSP53701 268 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 IAH1Q2TAA2 248 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-201ENST00000303531 LPCAT3Q6P1A2 487 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 BRICD5Q6PL45 260 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 ZNF813Q6ZN06 617 aa12.8□□□□□ -0.36
PRKCB-201ENST00000303531 H1FNTQ75WM6 255 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms