RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 FAM74A1Q5RGS3 127 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 SGPP2Q8IWX5 399 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 NLGN4YQ8NFZ3 816 aaPredicted RBP10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 OR8J2Q8NGG1 315 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 SLC19A3Q9BZV2 496 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 FAM117AQ9C073 453 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 ACAD8Q9UKU7 415 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 THSD7BQ9C0I4 1608 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 OR6C6A6NF89 314 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 GLAP06280 429 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 CCL11P51671 97 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 TRAF4Q9BUZ4 470 aaPredicted RBP10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 IKZF5Q9H5V7 419 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 FAM212BQ9NTI7 297 aaPredicted RBP10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 TRAPPC4Q9Y296 219 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 SLC22A23A1A5C7 686 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 GPR171O14626 319 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 SHOXO15266 292 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 GPR75O95800 540 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 ABOP16442 354 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 SLC2A5P22732 501 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 GGTA1PQ4G0N0 100 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 NKAIN1Q4KMZ8 207 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 STPG1Q5TH74 334 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 ABI3BPQ7Z7G0 1075 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 CARFQ8N187 725 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 CCL4L1Q8NHW4 92 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 UCN3Q969E3 161 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 LRRC3BQ96PB8 259 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 OCSTAMPQ9BR26 566 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 ACTRT3Q9BYD9 372 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 SMOC1Q9H4F8 434 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 FLVCR2Q9UPI3 526 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 URGCP-MRPS24S4R325 110 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 TRIOBPQ9H2D6 2365 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 MKRN2OSH3BPM6 223 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 SOCS6O14544 535 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 MAGEB4O15481 346 aaPredicted RBP10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 MAP2K6P52564 334 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 AWAT2Q6E213 333 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 FAM83HQ6ZRV2 1179 aaPredicted RBP10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 MVB12AQ96EY5 273 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 SLC25A32Q9H2D1 315 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 DHCR7Q9UBM7 475 aaKnown RBP10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 NPFFR2Q9Y5X5 522 aa10.46□□□□□ -0.74
NPC1L1-201ENST00000289547 A0A0U1RQK1 487 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 VSTM2BA6NLU5 285 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 LEUTXA8MZ59 168 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 GPRIN2O60269 458 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 RAD51DO75771 328 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 PIPP12273 146 aaPredicted RBP10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 CNR1P21554 472 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 BCL2A1Q16548 175 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 RDH10Q8IZV5 341 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 BPIFA2Q96DR5 249 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 LIN7BQ9HAP6 207 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 C19orf12Q9NSK7 152 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 TRBV5-4A0A0C4DH59 114 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 M0R082 166 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 ALOX12BO75342 701 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 ELAVL4P26378 380 aaKnown RBP10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SSR4P51571 173 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SQSTM1Q13501 440 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 CDONQ4KMG0 1287 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 COX20Q5RI15 118 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 LYPD8Q6UX82 237 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 OR8D4Q8NGM9 314 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 GPBAR1Q8TDU6 330 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 PATE1Q8WXA2 126 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 DVL3Q92997 716 aaPredicted RBP10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 HCAR1Q9BXC0 346 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 GABARAPL1Q9H0R8 117 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SLC25A37Q9NYZ2 338 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 A0A1W2PQF6 199 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 HTR3BO95264 441 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 IFNGR1P15260 489 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 CD80P33681 288 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 CLDN6P56747 220 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 PLA2G7Q13093 441 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SYT14P1Q58G82 188 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 STEAP1BQ6NZ63 245 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 RPL22L1Q6P5R6 122 aaKnown RBP10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 ZNF322Q6U7Q0 402 aaPredicted RBP10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 LMNTD1Q8N9Z9 388 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SLC38A5Q8WUX1 472 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 YIPF5Q969M3 257 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SYT3Q9BQG1 590 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 ST6GALNAC5Q9BVH7 336 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SAMD10Q9BYL1 202 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SEMA4CQ9C0C4 833 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 NRIP3Q9NQ35 241 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 TRAV27A0A087WT01 109 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 TMEM129A0AVI4 362 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 BPNT1O95861 308 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SBK3P0C264 359 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 RAD52P43351 418 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 ZNF136P52737 540 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 RSU1Q15404 277 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 OR5M10Q6IEU7 315 aa10.45□□□□□ -0.74
NPC1L1-201ENST00000289547 SLC18B1Q6NT16 456 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms