RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 IL5RAQ01344 420 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 MAD2L1BPQ15013 274 aaPredicted RBP19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 ETFDHQ16134 617 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 BTLAQ7Z6A9 289 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 C20orf196Q8IYI0 205 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 C8orf59Q8N0T1 100 aaPredicted RBP19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 DEPDC4Q8N2C3 294 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 FAM26EQ8N5C1 309 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 NOXO1Q8NFA2 376 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 OR9Q1Q8NGQ5 310 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 CNIH3Q8TBE1 160 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 FBLIM1Q8WUP2 373 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 TMEM54Q969K7 222 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 ZNF837Q96EG3 531 aaPredicted RBP19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 PLEKHA8Q96JA3 519 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 LRR1Q96L50 414 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 CNBD2Q96M20 576 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 NUAK2Q9H093 628 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 UBAP1Q9NZ09 502 aa19.27■□□□□ 0.68
PDLIM3-203ENST00000284771 CGAP01215 116 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 CTLA4P16410 223 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 CASP6P55212 293 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 CLRN1P58418 232 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 RIPPLY2Q5TAB7 128 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 AADACL4Q5VUY2 407 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 MCHR2Q969V1 340 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 ZFP3Q96NJ6 502 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 SNX18Q96RF0 628 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 PRRG3Q9BZD7 231 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 SRA1Q9HD15 236 aaKnown RBP19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 SLC7A10Q9NS82 523 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 ASB6Q9NWX5 421 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 GLTPQ9NZD2 209 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 PRSS50Q9UI38 385 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 EMC9Q9Y3B6 208 aa19.27■□□□□ 0.67
PDLIM3-203ENST00000284771 M0R3G1 203 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 CCL21O00585 134 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 SLC43A1O75387 559 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 CRHP06850 196 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 SMN1Q16637 294 aaKnown RBP19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 SLC25A30Q5SVS4 291 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 CXXC5Q7LFL8 322 aaKnown RBP19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 HDDC2Q7Z4H3 204 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 THAP5Q7Z6K1 395 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 PRR7Q8TB68 274 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 APH1AQ96BI3 265 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 ALG12Q9BV10 488 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 PLSCR4Q9NRQ2 329 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 HSPE1-MOB4S4R3N1 261 aa19.26■□□□□ 0.67
PDLIM3-203ENST00000284771 CENPBD1B2RD01 187 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 PRR23D1E9PI22 279 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 AKAP8O43823 692 aaKnown RBP19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 QDPRP09417 244 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 PRR23D2P0DMB1 279 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 OR3A2P47893 321 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 CSNK1A1P48729 337 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 FOXG1P55316 489 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 CDK5R2Q13319 367 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 FJX1Q86VR8 437 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 SETD9Q8NE22 299 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 OR51L1Q8NGJ5 315 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 OR6K3Q8NGY3 331 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 OR6N1Q8NGY5 312 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 OTULINQ96BN8 352 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 ALKBH3Q96Q83 286 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 SLCO5A1Q9H2Y9 848 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 DNAJC27Q9NZQ0 273 aa19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 DIDO1Q9BTC0 2240 aaKnown RBP19.25■□□□□ 0.67
PDLIM3-203ENST00000284771 AHCYL1O43865 530 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 SLC16A7O60669 478 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 ENTPD6O75354 484 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 RENP00797 406 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 SPI1P17947 270 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 SLC2A5P22732 501 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 CTSSP25774 331 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 THEM4Q5T1C6 240 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 TFAP2EQ6VUC0 442 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 B3GLCTQ6Y288 498 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 ZBTB46Q86UZ6 589 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 LIX1LQ8IVB5 337 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 ZNF100Q8IYN0 542 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 B9D1Q9UPM9 204 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 FAM171A2A8MVW0 826 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 ZNF133P52736 654 aaPredicted RBP19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 OCLNQ16625 522 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 NXNL2Q5VZ03 156 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 SLC25A47Q6Q0C1 308 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 ZNF582Q96NG8 517 aaPredicted RBP19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 RBP7Q96R05 134 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 LINC00470Q9BZP3 86 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 OR51V1Q9H2C8 321 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 RERGLQ9H628 205 aa19.24■□□□□ 0.67
PDLIM3-203ENST00000284771 IGLV1-36A0A0B4J1U3 117 aa19.23■□□□□ 0.67
PDLIM3-203ENST00000284771 LRRTM2O43300 516 aa19.23■□□□□ 0.67
PDLIM3-203ENST00000284771 MPZL2O60487 215 aa19.23■□□□□ 0.67
PDLIM3-203ENST00000284771 GPANK1O95872 356 aa19.23■□□□□ 0.67
PDLIM3-203ENST00000284771 PYCR1P32322 319 aa19.23■□□□□ 0.67
PDLIM3-203ENST00000284771 SLC25A1P53007 311 aa19.23■□□□□ 0.67
PDLIM3-203ENST00000284771 LINC01590Q5TEZ4 76 aa19.23■□□□□ 0.67
PDLIM3-203ENST00000284771 TMEM211Q6ICI0 200 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms