RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HIST2H3AQ71DI3 136 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OAFQ86UD1 273 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR51L1Q8NGJ5 315 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR51Q1Q8NH59 317 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 SPRYD4Q8WW59 207 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-201ENST00000258733 SMARCD2Q92925 531 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 VOPP1Q96AW1 172 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 CCDC115Q96NT0 180 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 PNMA5Q96PV4 448 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 SYT3Q9BQG1 590 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 CHRNA10Q9GZZ6 450 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM231Q9H6L2 316 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 PIPOXQ9P0Z9 390 aa7.07□□□□□ -1.28
GPNMB-201ENST00000258733 OR11H12B2RN74 326 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 GJB5O95377 273 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2ABP04908 130 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 DPP4P27487 766 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 LTBRP36941 435 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SREBF1P36956 1147 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 MAGEA12P43365 314 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 GATA4P43694 442 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ASCL1P50553 236 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 RAG2P55895 527 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 UCP3P55916 312 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HYAL1Q12794 435 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TCP10Q12799 353 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TPBGQ13641 420 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 IFI44LQ53G44 452 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 PDLIM3Q53GG5 364 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 C5orf47Q569G3 176 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CARD16Q5EG05 197 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 NOL9Q5SY16 702 aaKnown RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM91Q6ZNR0 172 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HIST3H2AQ7L7L0 130 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OVCH1Q7RTY7 1134 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR2W3Q7Z3T1 314 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TMED4Q7Z7H5 227 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 C17orf78Q8N4C9 275 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HORMAD2Q8N7B1 307 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR11H1Q8NG94 326 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR6N1Q8NGY5 312 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR14K1Q8NGZ2 314 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR11H2Q8NH07 326 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM163Q8TC26 289 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 BRIX1Q8TDN6 353 aaKnown RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 RGP1Q92546 391 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 DYRK2Q92630 601 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HIST1H2ACQ93077 130 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SMARCD1Q96GM5 515 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SOSTQ9BQB4 213 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 RIOK2Q9BVS4 552 aaKnown RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 COLEC11Q9BWP8 271 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HDAC8Q9BY41 377 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SLC25A31Q9H0C2 315 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 RRAGCQ9HB90 399 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR2S2Q9NQN1 319 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SLC2A8Q9NY64 477 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SLC9A2Q9UBY0 812 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CGGBP1Q9UFW8 167 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 EMCNQ9ULC0 261 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 LRP12Q9Y561 859 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ENPP4Q9Y6X5 453 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 BAZ2AQ9UIF9 1905 aaKnown RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TGIF2-C20orf24A0A0A6YYL0 155 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TRAPPC2LH3BP13 241 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 EIF4E2O60573 245 aaKnown RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 METTL18O95568 372 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 NDUFB10O96000 172 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CSF1P09603 554 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 PGA3P0DJD8 388 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CD79AP11912 226 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 MGMTP16455 207 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 EPHA2P29317 976 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ADORA1P30542 326 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 MTNR1AP48039 350 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HBA1P69905 142 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 RBBP4Q09028 425 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 KLF1Q13351 362 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 NTRK2Q16620 822 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM241Q24JQ0 296 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SLC39A4Q6P5W5 647 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 GJB7Q6PEY0 223 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CNIH2Q6PI25 160 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 HEPN1Q6WQI6 88 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TRMT1LQ7Z2T5 733 aaKnown RBP7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ZNF605Q86T29 641 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 CCNYQ8ND76 341 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM239Q8WW34 195 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 MCHR2Q969V1 340 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ROPN1LQ96C74 230 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 IL4I1Q96RQ9 567 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 ARHGDIGQ99819 225 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 OR8D2Q9GZM6 311 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 SLC2A4RGQ9NR83 387 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 THSD1Q9NS62 852 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 FOXJ3Q9UPW0 622 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 PLXND1Q9Y4D7 1925 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 UBE2QL1A1L167 161 aa7.06□□□□□ -1.28
GPNMB-201ENST00000258733 C7orf77A4D0Y5 90 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms